Paraburkholderia tropica: G5S35_06430
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Entry
G5S35_06430 CDS
T07044
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00300
Lysine biosynthesis
ptro01100
Metabolic pathways
ptro01120
Microbial metabolism in diverse environments
ptro01230
Biosynthesis of amino acids
Module
ptro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5S35_06430 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptro01002
]
G5S35_06430 (dapE)
Enzymes [BR:
ptro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
G5S35_06430 (dapE)
Peptidases and inhibitors [BR:
ptro01002
]
Metallo peptidases
Family M20
G5S35_06430 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QNB11240
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All DBs
Position
A:complement(1432614..1433750)
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AA seq
378 aa
AA seq
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MSATLALTEALIARASVTPDDQHCQRIMTERLSALGFACETIESNGVTNLWAVKRGTDAD
APLLAFAGHTDVVPTGPIEQWSSPPFQPSHRDGVLYGRGAADMKTSLAAFVVASEEFVAA
HPQHRGAIAFLITSDEEGPATDGTVKVVEALQARGVKMDYCIVGEPTSTNTLGDCVKNGR
RGSMSGKLVVKGVQGHIAYPHLAKNPVHLLAPALAELVAEKWDDGNEYFPPTTWQVSNLH
SGTGASNVIPGHADVQFNFRFSTASTVEGLQQRVHAILDKHGLEYDLHWSISGLPFLTPR
GALSNALEKAIHDETGVTTELSTTGGTSDGRFIARMCPQVVEFGPPNGSIHKIDEHIEVK
FIDPLKNVYRRVLEQLIA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccctcgcccttaccgaagccctgatcgcgcgcgcgtccgtgacgcccgac
gaccagcactgccagcgcatcatgaccgaacgcctcagcgcgctcggcttcgcgtgcgaa
acgatcgaatccaacggcgtgaccaacctgtgggccgtcaagcgcggcacggacgccgac
gcgccgctgctcgccttcgcgggtcacaccgacgtggtgccgaccggccccatcgagcaa
tggagctcgccgccgttccagccctcgcaccgcgacggcgtgctctacggccgcggcgcc
gccgacatgaagacctcgctcgccgccttcgtggtcgccagcgaagaattcgtggcggcg
cacccgcagcatcgcggtgcgatcgccttcctgatcacgagcgacgaggaaggccccgcg
accgacggcaccgtcaaggtggtcgaggcgcttcaggcgcgcggcgtgaagatggactac
tgcatcgtcggcgaaccgacgtcgacgaatacgctcggcgactgcgtgaaaaacggccgc
cgcggctcgatgtcgggcaagctcgtcgtcaagggcgtgcagggccacattgcctatccg
catctcgcgaagaatccggtgcatctgctggcgccggcgctcgccgaactcgtcgccgaa
aaatgggacgacggcaacgaatacttcccgcccaccacgtggcaggtctcgaacctgcac
agcggcacgggcgcgagcaacgtgattccgggccacgccgacgtgcagttcaacttccgc
ttctcgaccgcgagcacggtggaaggtctgcaacagcgcgtgcatgcgattctcgacaag
cacggtctcgaatacgatctgcactggagcatcagcggcctgcccttcctcacgccgcgc
ggcgcgctctcgaacgcgctcgaaaaagcgattcacgacgaaaccggcgtgaccaccgag
ctgtcgaccactggcgggacttcggacggccgcttcatcgcgcgcatgtgcccgcaggtc
gtggagttcgggccgcccaacggcagcatccacaagatcgatgagcacatcgaagtcaaa
ttcatcgacccgctcaagaacgtgtaccgccgcgtgctcgaacagctgatcgcctga
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