Paraburkholderia tropica: G5S35_06880
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Entry
G5S35_06880 CDS
T07044
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
ptro
Paraburkholderia tropica
Module
ptro_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptro02000
]
G5S35_06880
01504 Antimicrobial resistance genes [BR:
ptro01504
]
G5S35_06880
Transporters [BR:
ptro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G5S35_06880
Antimicrobial resistance genes [BR:
ptro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
G5S35_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Beta-prism_lec
Motif
Other DBs
NCBI-ProteinID:
QNB11323
LinkDB
All DBs
Position
A:complement(1542064..1545222)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSEVPEQEHDREPGADHQEGRFNLSAWALRHQALVIFVIALATIFGALSYTRLSQSEDPP
FTFRVMVIQTFWPGATARQVEDEVTSRIGRKLQETPYIDFLRSYSRPGESLVFFTMKDSA
PVSEVRETWYQVRKKVGDIAPMLPQGVQGPFFNDEFGDVYTNIYTLEGDGFSPAQLHDYA
DKLREELLRLKDVGKVDYFGDPNQRIYIEIPNAQLTRLGISPTQIGQVIGAQNSVAASGT
LTTADDRVFVRPSGQFTDLKTLADTLITVNGHNFRLGDIATIRRGYDDPLATQMRYDGKA
VLGIGITMQPGGDVIRLGKALDARIDTLRAELPAGLKLTEVSSMPDAVSHSVDDFVEAVA
EAVGIVLVVSLVSLGVRTGMVVVITIPIVLAVTALVMFLFDIGLHKVSLGTLVLALGLLV
DDAIISVEMMAVKLAQGWNRTRAAAFAYTSTAFPMLTGTLVTVSGFLPIVLAKSSTGEYT
RSIFQVSAIALIASWFAAVVLIPLLGYRLLPERKRDANAPHDEHHEDDIYDTRFYHRLRG
WIGWCIERNFVVLGLTLVLFVVALAGFTLIPQQFFPSSDRPELLVDVRLPEGASFDATLR
QAKRLEEALKGRPEIDHSIDFVGTGAPRFYLPLDQQLQQPNFAQFVITAKSVKDREKLAE
WLETKLRNDFPAVRTRLSRLENGPPVGYPVQFRVSGDDIATVRGIADRVAAAMRADKRTE
NVSFDWDEPAERSLHFEIDQQKARALNVSSQDVANFLQMTYSGYTVTQYRERDKLISVDL
RSPPNERVDPAHMLSLAMPTPNGPVPLGALGHLENTLEYGVIWSRDRQPTITVQSDVRQG
AQGIDVTHALQKTLKSIQATLPTGYRIEVGGSVEESMKGQTSIYAQLPILVIAVLTLLMI
QLQSLSRVMMVVLTAPLGLIGVAVALLLFNEPFGFVAMLGVIAMFGIIMRNSVILVDQIE
MDIRAGHPRFDAIVGATVRRFRPIMLTAAAAVLALIPLVRSNFFGPMATALMGGITSATV
LTLFFLPALYATAFRVRSSETDQPQANAGKAS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgcccgagcaggaacacgaccgcgagccaggcgcggatcatcaggaaggc
cgctttaatctctccgcctgggcgctgcgccatcaggcgctggtgatcttcgtgatcgcg
ctcgcgacgatcttcggcgcgctctcgtacacgcgtctttcgcagtccgaggatccgccc
ttcacgttccgcgtgatggtgatccagaccttctggcccggcgcgaccgcgcgccaggtc
gaggacgaagtcacgagccgcatcggccgcaagctccaggaaacgccgtatatcgacttc
ctgcgcagctattcgcgtccgggcgagtcgctggtgttcttcacgatgaaggattccgcg
cccgtcagcgaggtgcgcgaaacgtggtatcaggtgcgcaagaaggtcggcgacatcgcg
ccgatgctgccgcaaggcgtgcaaggcccgtttttcaacgacgaattcggcgacgtctac
accaacatctacacgctcgaaggcgacggcttctcgcccgcgcaactgcacgactacgcc
gacaagctgcgcgaggaactgctgcgcttgaaggacgtgggcaaggtcgattatttcggc
gacccgaaccagcgcatctacatcgaaattccgaacgcgcagctcacgcgcctcggcatt
tcgcctacgcagatcggccaggtgatcggcgcgcagaacagcgtcgcggcctcgggcacg
ctcaccaccgccgacgaccgtgtgttcgtgcgcccgagcggccagttcaccgacctcaag
acgctcgccgacacgctcatcaccgtgaacggccacaacttccggctcggcgacatcgcc
acgatccggcgcggctacgacgatccgctcgccacgcagatgcgctacgacggcaaggcc
gtgctcggcatcggcatcacaatgcagccgggcggcgacgtgatccggctcggcaaagcg
cttgacgcccgtatcgacaccttgcgcgccgaactgcccgcgggcctcaagcttaccgaa
gtgtcgagcatgcccgacgcggtctcgcattccgtcgacgacttcgtcgaagccgtggcc
gaagccgtcggcatcgtgctggtcgtgagcctcgtctcgctgggcgtgcgcacgggcatg
gtggtcgtcatcacgattccgatcgtgctggccgtcaccgcgctcgtgatgtttctgttc
gacatcggcctgcacaaggtctcgctcggcacgctggtgctcgcgctcggcctgctcgtc
gacgacgcgatcatctccgtcgaaatgatggccgtgaagctcgcgcagggctggaaccgc
acgcgcgccgccgccttcgcgtacacgagcacggcgttcccaatgctcaccggcacgctc
gtgaccgtctcgggctttttgccgattgtgctggcgaagtcgagcacgggcgaatacacg
cgctcgattttccaggtgtcggcgattgcgctgatcgcgtcgtggttcgcggccgtggtg
ctgattccgctgctcggctaccgcctgctgcccgagcgcaagcgtgacgccaatgcgccg
cacgacgagcatcacgaagacgacatctacgacacgcgtttctaccatcggctgcgcggc
tggatcggctggtgcatcgagcgcaacttcgtcgtgctcgggctcacgctggtgctgttc
gtggtcgcgctcgcgggcttcacgctgatcccgcagcagtttttcccgagttccgatcgc
cccgaactgctcgtcgacgtgcggctgcccgaaggcgcatcgttcgacgcgacgctgcgc
caggcgaagcgactcgaagaagcgctcaagggccgtccggaaatcgatcattcgatcgac
ttcgtcggcaccggcgcgccgcgtttctatctgccgctcgaccagcaattgcagcagccg
aatttcgcgcagttcgtcatcacggcgaagtcggtgaaggatcgcgagaagctggcagaa
tggctcgaaaccaaactgcgcaacgattttccagcggtgcgcacgcgtctttcgcggctg
gagaacgggccgcccgtcggctatccggtgcagttccgcgtgagcggcgacgacatcgcg
accgtgcgcggcatcgccgatcgcgtggccgcggccatgcgcgccgacaagcgcaccgaa
aacgtcagcttcgactgggacgaaccggccgaacgctcgctgcacttcgagatcgatcag
cagaaggcgcgcgcgctcaatgtgagttcgcaggatgtcgccaacttcctgcagatgacc
tactccggctacaccgtcacgcagtatcgcgagcgcgacaagctcatcagcgtcgatctg
cgctcgccgcccaacgagcgcgtcgatcccgcgcacatgctctcgctcgccatgcccacg
ccaaacggcccggtgccgctcggcgcgctcgggcatctcgagaacacgctcgaatacggc
gtgatctggtcgcgcgaccggcagcccaccatcaccgtgcagtccgatgtgcgccagggc
gcgcaagggatcgacgtcacccatgcgttgcagaaaacgctcaagtcgatccaggccacg
ctgccgacgggttatcggatcgaagtgggcggctcggtcgaggaaagcatgaaaggccag
acgtcgatctacgcgcagttgccgatactcgtgatcgccgtgctcacgctgctgatgatc
cagttgcaaagtctgtcgcgcgtgatgatggtcgtgctgacggcgccgctcgggctgatc
ggcgtggccgtcgcgctgctgctgttcaacgagccgttcggctttgtcgcgatgctcggc
gtgatcgccatgttcggcatcatcatgcgcaactcggtgattctcgtggatcagatcgag
atggatatccgcgcggggcatccgcgcttcgacgccatcgtgggcgcgaccgtgcggcgt
ttccgcccgatcatgctgacggcggcggccgccgtgctcgcgctcattccgctcgtgcgc
tctaacttcttcgggccgatggccaccgcgctgatgggcggcatcacgagcgccacggtg
ctcacgctgttcttcctgcccgcgttgtacgcgaccgcgttccgcgtgcgcagcagcgaa
accgaccagcctcaagcgaacgcggggaaagcatcatga
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