Paraburkholderia tropica: G5S35_07605
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Entry
G5S35_07605 CDS
T07044
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptro03009
]
G5S35_07605 (rimO)
Enzymes [BR:
ptro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G5S35_07605 (rimO)
Ribosome biogenesis [BR:
ptro03009
]
Prokaryotic type
ribosomal protein modification factors
G5S35_07605 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNB11452
LinkDB
All DBs
Position
A:complement(1709249..1710706)
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AA seq
485 aa
AA seq
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MVDWPEHRAAQRTPCAPPPDVHVKNPVESTTSRNPAPRVGMVSLGCPKALVDSEQIITQL
RAEGYEISGSYDGADLVVVNTCGFIDEAVQESLDAIGEALSENGKVIVTGCLGKKASASG
SNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLPKPHDPFVDLVPAAGIKLTPRHYAYLKIS
EGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRT
GFWNGKPIKTRMTDLVTALGELAAQYNAWVRLHYVYPYPSVDEVIPLMAEGPFKGHVLPY
LDVPFQHAHPEVLKRMKRPANAEKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFETL
LDFIREAELDRVGCFAYSPVEGATANELEGALPDEVREARRARFMEVAEEVSAKRIQRKV
GKTLKVLIDEVNADGGIGRTAADAPEIDGVVYVAPATKASKRYKVGDFVSVKITGADGHD
LWGEV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtggattggcctgaacatcgcgcggcgcaacgaacgccctgcgccccacctccggac
gtacacgtgaaaaaccctgttgaatcaacgacctcccgcaatcccgcgccgcgcgtaggg
atggtgtccctcggctgtccaaaagcgcttgtcgactccgagcagatcattacccagctg
cgcgccgaaggttacgagatctcgggttcatacgacggcgccgacctcgtcgtggtcaat
acctgcggcttcatcgacgaagccgtgcaggaaagcctcgacgccatcggcgaagcgctg
agcgagaacggcaaggtcatcgtcacggggtgtctgggcaagaaggccagcgcgagcggt
tcgaacctgatcgaagaagtgcatccgaaggtgctggccgtgaccggcccgcacgccgtc
ggcgaagtgatgcaggcggtccacagccatctgccgaagccgcacgatccgttcgtcgac
ctcgtgccggccgcgggcatcaagctcacgccgcgtcattacgcctatctgaagatttcg
gaaggctgcaatcaccgctgcacgttctgcatcatcccgtcgatgcgcggcgatctggtc
tcgcgtccggttgcggaagtgatgctcgaagcggaaaacctcttcaagtcgggcgtgaag
gaactgctcgtgatctcgcaggacacgagcgcgtacggtgtcgacgtcaagtaccgcacg
ggtttctggaacggcaagccgatcaagacgcgcatgaccgatctggtcacggcgctcggc
gaactcgccgcgcagtacaacgcgtgggtccgcctgcattacgtgtatccgtatccgagc
gtggacgaagtcattccgctgatggccgaaggtccgttcaagggccacgtgctgccgtat
ctcgacgtgccgttccagcacgcgcaccccgaggtgctcaagcgcatgaagcgtcccgcg
aacgccgaaaaggtcatggagcgcgtgaaggcgtggcgtgaaatgtgcccggatctcacg
atccgcagcacgttcatcgccggtttccccggtgagacggaagagcagttcgaaacgctg
ctcgacttcatccgcgaagccgaactcgaccgcgtgggctgtttcgcctactcgccggtc
gaaggcgcgacggccaacgaactcgaaggcgcgctgcccgacgaagtgcgcgaggcacgc
cgcgcgcgcttcatggaagtcgccgaggaagtgtcggcgaagcgcatccagcgcaaggtt
ggcaagacgctcaaggtgctgatcgacgaagtgaacgccgacggcggcatcggccgcacg
gcggcggacgcgcccgagatcgacggcgtggtctacgttgcgccggcgaccaaggcgtcg
aagcgttacaaggttggcgatttcgtctcggtgaagatcacgggcgccgacggccacgac
ctctggggcgaggtctga
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