Paraburkholderia tropica: G5S35_07720
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Entry
G5S35_07720 CDS
T07044
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S35_07720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptro03021
]
G5S35_07720
03019 Messenger RNA biogenesis [BR:
ptro03019
]
G5S35_07720
Transcription machinery [BR:
ptro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G5S35_07720
Messenger RNA biogenesis [BR:
ptro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5S35_07720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
QNB11472
LinkDB
All DBs
Position
A:1735654..1736916
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKVLLLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVVLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPDILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNSEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgagctcaagtctctgcacgtgtccgaattgatcgagatggccaatggc
ctcgagatcgaaaatgcgaaccgcctgcgcaagcaggaactgatgttcgcgattctcaaa
aagcgcgccaagacgggcgaaacgatcttcggtgacggcacgcttgaagtgctgccggac
ggattcggcttcctgcgctcgccggaaacctcgtatctcgccagcacggacgatatctat
atcagcccgtcgcagatccgccgcttcaatctgcacaccggcgacacgatcgaaggtgaa
gtgcgtacgccgaaggacggcgaacgctatttcgcgctcgtgaaggtggacaaggtcaac
ggccagccgccggaagcctcgaagcacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaaggtgctgctgctcgagcgcgaaatgcgcggtgaggagaacgtgacgggccgc
atcatcgacatgatcgcgcccatcggcaagggtcaacgcggcctgctggtcgcatcgccc
aagtccggcaagaccgtgatgcttcagcacatcgcgcacgccatcaagcagaaccacccc
gacgtggtcctgttcgtgctgctgatcgacgagcgtccggaagaagtgacggaaatgcag
cgttcggtcgcgggcgaagtgatcgcctcgacgttcgacgaaccggccgcgcgtcacgtg
caggtcgccgaaatggtgatcgaaaaggccaagcgcctcgttgaaatgaagcacgacgtc
gtgattctgctcgactccatcacgcgtctcgcgcgcgcctacaacacggtcgtgccggct
tcgggcaaggtgctgacgggtggtgtggacgctaacgcgctgcaacgtccgaagcgtttc
ttcggcgcggcgcgtaacatcgaagaaggcggttcgctcacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcacgggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagagttgctgatcaagccggacatcctccagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaagcaatggaattcctgctc
gacaagattcgccagacgaagaacaactccgagttcttcgacatgatgcgccgcggcggc
taa
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