Paraburkholderia tropica: G5S35_10535
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Entry
G5S35_10535 CDS
T07044
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00630
Glyoxylate and dicarboxylate metabolism
ptro00680
Methane metabolism
ptro01100
Metabolic pathways
ptro01120
Microbial metabolism in diverse environments
ptro01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5S35_10535 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
G5S35_10535 (fdhF)
Enzymes [BR:
ptro01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
G5S35_10535 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_9
Fer4_NDSU1
Fer4_Nqo3
Fer4_15
Fer4_2
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QNB11961
LinkDB
All DBs
Position
A:2343576..2346521
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AA seq
981 aa
AA seq
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MSDTLMSQAGGCGSGNCACKSAAMNKANARSPFDDTDYGTPLRHADVDVTLEIDGQSVTV
PAGTSVMRASIEAGVNVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPVEAGMKVR
TQTDRLQKLRRNVMELYISDHPLDCLTCPANGDCELQDMAGVTGLREVRYGFDGANHLKN
QKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTIAARGFESRVAAGAGEAFMDSECV
SCGACVAACPTATLQEKSVVMLGQAEHSVVTTCAYCGVGCSFKAEMKGNQVVRMVPHKNG
QANEGHACVKGRFAWGYATHKDRIKKPMIRAKITDPWREVSWEEAIAYAASEFRRIQAKH
GRDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQ
TFASVDHSDVIMVIGANPTDGHPVFGSRLKRRVRQGAKLIVVDPRRIDIVDTAHVKAEHH
LQLRPGTNVAMVNALAHTIVTEGLVNEAFVAERCETRAFEQWRDFVALPENAPEAMEAVT
GVPAALVRAAARRYAQPGNSAIYYGLGVTEHAQGSTMVMGIANLAMATGNIGREGVGVNP
LRGQNNVQGSCDMGSFPHELPGYRHVGDSTTRALFEDAWQVTLQSEPGLRIPNMFEAALD
GTFMGLYCQGEDIVQSDPNTQHVAAALSSMECIVVQDIFLNETAKYAHVLLPGSSFLEKD
GTFTNAERRISRVRKVMPPIAGYADWEATILLARALGYEMDYTHPSQIMDEIARLTPTFH
GVSYARLDEMGSIQWPCNEDAPDGTPIMHIDAFVRGKGKFVITKFIASPEKVTRRFPLLL
TTGRILSQYNVGAQTRRTDNSRWHEEDRLEIHPVDADDRGIRDGDWVGIESRAGQTVLRA
KVSTRMQPGVVYTTFHFPESGANVITTDASDWATNCPEYKVTAVQVNHVQQPSDWQREYS
RFNETQLELHRSREPLTTSGK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacgctcatgtcccaagccggtggttgcggttccggcaattgcgcctgcaaa
agcgcggcaatgaacaaagccaacgcccgctcgcccttcgacgacaccgactacggcacg
ccgctgcgccacgccgatgtcgacgtcacgctcgaaatcgacggtcagtccgtgacggtt
ccggcaggcacctcggtgatgcgcgcttcgatcgaagccggcgtcaacgtgcccaagctc
tgcgcgaccgactcgctcgaaccgtttggctcgtgccgtctgtgtctcgtcgaaatcgaa
gggcggcgcggttacccggcgtcgtgcacgacacccgtcgaagcgggcatgaaggtgcgc
acgcaaaccgaccgtctgcagaaactgcgccgcaacgtgatggagctctacatctccgat
cacccgctcgactgcctcacctgccccgccaacggcgactgcgaactgcaggacatggcg
ggcgtgacgggcctgcgcgaagtgcgctacggcttcgacggcgcgaatcacctgaagaac
cagaaggacgaatcgaacccgtacttcacctacgatccgtcgaagtgcatcgtctgcaac
cgctgcgtgcgcgcctgcgaggaaacgcaaggcacgttcgcgctgaccatcgccgcgcgc
ggtttcgaatcgcgcgtcgcggccggcgcgggcgaagcgttcatggattcggaatgcgtg
tcgtgcggcgcctgcgtcgccgcctgcccgaccgcgacgctgcaggaaaagagcgtggtg
atgctcggccaggccgaacattcggtggtcacgacctgcgcgtattgcggcgtcggctgc
tcgttcaaggccgagatgaagggcaaccaggtcgtgcgcatggtgccgcacaagaacggt
caggcgaacgaaggccatgcctgcgtgaagggccgtttcgcgtggggctatgccacgcac
aaggaccgcatcaagaagccgatgattcgcgcgaagatcaccgatccgtggcgcgaagtg
agctgggaagaagcgatcgcctacgcggccagcgagttccgccgcatccaggccaagcat
ggccgcgattcgatcggcggcatcacctcgtcgcgctgcacgaacgaggaaacctatctc
gtgcagaagctcgtgcgcgccgcgttcggcaacaacaacgtcgacacctgcgcgcgcgtg
tgccactcgcccacgggctatggcctgaagaccacgctcggcgaatcggcgggcacgcag
acgttcgcgtcggtcgatcactcggacgtgatcatggtgatcggcgcgaatccgaccgac
ggccatccggtgttcggctcgcgtctgaagcggcgcgtgcgtcagggcgcgaagctgatc
gtcgtcgatccgcgccgcatcgatatcgtcgatactgcgcacgtgaaggccgagcatcat
ctgcaactgcgccccggcaccaacgtggcgatggtcaacgccctcgcccacacgatcgtc
accgaagggctcgtgaacgaagccttcgtggccgagcgctgcgagacgcgcgcgttcgag
cagtggcgcgatttcgtcgcgctgccggagaatgcgccggaagcgatggaagccgtcacg
ggcgtgcccgccgcgctcgtgcgcgcggccgcgcggcgctacgcgcagccgggcaactcg
gcgatctattacggcctcggcgtgacggaacacgcacaaggctcgacgatggtgatgggc
atcgccaacctcgcgatggctacgggcaacatcggccgcgaaggcgtgggcgtgaacccg
ctgcgcggccagaacaacgtgcagggttcgtgcgacatgggctcgttcccgcacgaactg
ccgggctatcgccacgtcggcgacagcacgacgcgcgcgctgttcgaagacgcctggcag
gtcacgctgcaaagcgagccgggcctgcgcattccgaacatgttcgaagcggcgctcgac
ggcaccttcatgggtctttactgccagggcgaagacatcgtccagtccgatccgaacacg
cagcatgtggcggcggcgctctcgtcgatggaatgcatcgtcgtgcaggacatcttcctg
aacgaaacggcgaagtacgcgcacgtgctgctgccgggttcgtcgttcctcgaaaaggac
ggcaccttcacgaacgccgagcgccgcatctcgcgcgtgcgcaaggtcatgccgccgatc
gccggttacgccgactgggaagcgacgatcctgctcgcgcgcgcgctcggctacgagatg
gactacacgcatccgtcgcagatcatggacgaaatcgcgcgtctcacgccgaccttccat
ggcgtctcgtatgcgcggctcgacgaaatgggcagcatccagtggccctgcaacgaagac
gcgccggacggcacgccgatcatgcacatcgacgccttcgtgcgcggcaagggcaagttc
gtcatcacgaagttcatcgcttcgccggagaaagttacgcggcgcttcccgctgctgctc
acgacgggccgcattctgtcgcagtacaacgtgggcgcgcagacgcgccgcaccgacaac
tcgcgctggcacgaagaggaccggctggagatccatcccgtcgacgccgacgatcgcggt
atccgcgacggcgactgggtgggcatcgaatcgcgcgcgggccagaccgtgctgcgcgcg
aaggtcagcacgcgcatgcagccgggcgtggtctacacgacgttccatttccccgaatcg
ggcgcgaacgtcatcaccaccgacgcctcggactgggccaccaactgccccgagtacaag
gtgaccgccgtgcaggtcaaccacgtgcagcagccgtcggactggcagcgcgagtattcg
cgtttcaacgagacgcagctcgaattgcatcgctcgcgcgaaccgctgaccacttcaggg
aaataa
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