Paraburkholderia tropica: G5S35_11530
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Entry
G5S35_11530 CDS
T07044
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00260
Glycine, serine and threonine metabolism
ptro00460
Cyanoamino acid metabolism
ptro00630
Glyoxylate and dicarboxylate metabolism
ptro00670
One carbon pool by folate
ptro00680
Methane metabolism
ptro01100
Metabolic pathways
ptro01110
Biosynthesis of secondary metabolites
ptro01120
Microbial metabolism in diverse environments
ptro01200
Carbon metabolism
ptro01230
Biosynthesis of amino acids
ptro01240
Biosynthesis of cofactors
ptro04981
Folate transport and metabolism
Module
ptro_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5S35_11530
09102 Energy metabolism
00680 Methane metabolism
G5S35_11530
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5S35_11530
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5S35_11530
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5S35_11530
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5S35_11530
Enzymes [BR:
ptro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5S35_11530
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QNB12138
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Position
A:complement(2556620..2557867)
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AA seq
415 aa
AA seq
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MFDRAESTIANVDPELFAAIELENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCENVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGM
SLAEGGHLTHGMALNMSGKWFNVVSYGLDANEDIDYDALEKRAHETKPKLIIAGASAFAL
RIDFERIAKVAKAVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTTTTHKSLRGPRGGVI
LMKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEAATPEFKTYQQQVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAVLGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGVKEAEQVGNLIADVLDNPEDAATIERVKAQVSELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagccgaaagcaccatcgccaacgtcgatcccgaactcttcgccgcgatc
gaactcgagaaccgccgccaggaagagcacatcgagctcatcgcgtcggaaaactacacc
tcgcccgccgtcatggccgcgcagggttcgcagctcaccaacaaatacgccgaaggctat
cccggtaagcgttattacggcggctgcgaaaacgtcgatatcgtcgagcagctcgcgatc
gaccgcgtcaaggcgctgttcggcgccgaagccgccaacgtccagccgaactccggctcg
caggccaaccagggcgtgttcttcgccgtcctgaagccgggcgacaccatcatgggcatg
agcctcgccgaaggcggccacctcacgcacggcatggcgctcaacatgagcggcaagtgg
ttcaacgtcgtgagctacgggctcgatgccaacgaagacatcgactacgacgcgctcgaa
aagcgcgcgcacgaaacgaagccgaagctgatcatcgcgggcgcgtcggcgttcgcgctg
cgcatcgacttcgagcgcatcgccaaggtcgccaaggccgtcggcgcgtacttcatggtc
gacatggcgcactacgcgggcctgatcgccgcgggcgtctacccgaacccggtgccgttc
gccgacttcgtcaccacgaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagcacgaaaaggccatcaactcggcgatcttcccgggcattcagggc
ggtccgctgatgcacgtgatcgcgggcaaggccgtggcgttcaaggaagccgcgacgccg
gagttcaagacctatcagcagcaagtggtcgagaacgcgcgcgtgctggctgaaacgctg
gtcaagcgcggtctgcgtatcgtctcggggcgcacggaaagccacgtgatgctggtcgat
ctgcgcgcgaagaacatcaccggcaaggctgcggaagcggtgctgggcgcggcgcacatc
accgtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggtatc
cgtctgggctcgccggcgatgaccacgcgcggcttcggcgtgaaggaagccgagcaggtc
ggcaatctgatcgccgatgtgctggacaacccggaagacgcagcgacgatcgagcgcgtg
aaggcgcaggtctcggagctgacgaagcgtttcccggtctaccgttaa
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