Paraburkholderia tropica: G5S35_11815
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Entry
G5S35_11815 CDS
T07044
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00550
Peptidoglycan biosynthesis
ptro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G5S35_11815 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptro01002
]
G5S35_11815 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptro01011
]
G5S35_11815 (dacB)
Enzymes [BR:
ptro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
G5S35_11815 (dacB)
Peptidases and inhibitors [BR:
ptro01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
G5S35_11815 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptro01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
G5S35_11815 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QNB12189
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All DBs
Position
A:2615497..2617323
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AA seq
608 aa
AA seq
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MPPVSSSPRSLRSLRRFWRLPSRQAASLASAGTPARARARTAGRTLSLTLVCAALSAAFC
AAPAAYAQPTEGRTPTVNVSTVLPPSVMTGLERAHVPLSSMSVVIEKVGDRSPSVAVNAG
QPMMPASTMKLVTTWSGLAMLGADYRWKTSAYTDGEVDASGTLHGNLYIKGTGDPKLVPE
ELIDLVQKIRASGITRIEGALVLDKSEFDPSTRDLPSFDGDDSAPYNVGPDPLMYAFKSV
SFTFSPSREGVSIDVVPPVAQWQIDNQIQERPGACRGMLPSPQVTPGANGVVTASFDGNY
AMRCGARTLNMAAPVDHSTFFADGFLALWQQAGGSFSGATHEGVVPPRARLVAVHQSPPL
GDVVHDINKFSNNVMARNLFLTLGAVEGKPPSTTAKAASAVTNFLHRNGLAMPELVLDNG
CGLSREEHISALSLANLLQTANASPVAQVFIDSLPVAGVDGTMRNRLTNAGVGGNAHIKT
GTLRDVRAIAGYVAAENGSSWIVVSLINDPRAEGARAAHDALLEWVYKGMPEEHPVYVDP
HPRKASKASRAGHGVRVERISESVGRKPAEKAPEKASEKASPKASAKAPAKTSAKASGKA
TKKHHAAH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgtttcgtcgtccccgcgctctcttcgctcccttcgccgcttctggcgcctg
ccgtcgcgtcaagccgccagcctcgcctccgcaggcacgcctgcacgggcgcgcgcccgc
accgccggccgcacgctctctctcacgctcgtctgcgccgcgctgagcgccgcgttctgc
gccgcgcccgccgcctacgcgcagccgaccgagggccgcacgccgaccgtcaacgtcagc
accgtgctgccgccttcggtcatgacggggctcgaacgcgcgcacgtgccgctttcgtcg
atgagcgtggtgatcgaaaaagtcggcgaccgctcgccgagcgtggccgtcaacgccggc
cagccgatgatgcccgcctcgacgatgaagctcgtcaccacctggagcggcctcgcgatg
ctcggcgccgactaccgctggaagacctcggcctacaccgacggcgaagtcgatgcgagc
ggcacgctgcacggcaatctctacatcaagggcaccggcgatccgaaactcgtgcccgaa
gaactgatcgacctcgtgcagaagatccgcgcgtcgggcatcacgcgcatcgaaggcgcg
ctcgtgctcgacaagagcgagttcgatccgtccacgcgcgacctgccctcgttcgacggc
gacgacagcgcgccctataacgtcggccccgatccgctgatgtacgcgttcaagtcggtg
tcgttcacgttctcgccgtcgcgcgaaggcgtctcgatcgacgtggtgccgccggtcgcg
caatggcagatcgacaaccagattcaggagcgccccggcgcgtgccgcggcatgctgccg
agcccgcaggtcacgcccggcgcgaacggcgtcgtcaccgccagcttcgacggcaactac
gcgatgcgctgcggcgcgcgcacgctcaacatggccgcgcccgtcgatcactcgacgttc
ttcgccgacggcttcctcgcgctctggcaacaggcgggcggcagcttctcgggcgcgacg
cacgaaggcgtcgtgccgccgcgcgcgcgcctcgtggccgtgcaccagagcccgccgctc
ggcgacgtcgtgcacgacatcaacaagttcagcaacaacgtgatggcgcgcaatctgttc
ctcacgctcggcgcggtcgagggcaagccgccttcaaccacggcgaaggccgcgtcggcg
gtgacgaacttcctgcaccgcaacggccttgcgatgcccgaactcgtgctcgacaacggc
tgcggcctgtcgcgcgaagagcacatcagcgcgctctcgctcgcgaacctgctgcagacg
gccaacgcgagcccggtcgcgcaggtctttatcgactcgctgccggtcgcgggcgtggac
ggcacgatgcgcaaccgcctgaccaacgcgggcgtgggcggcaacgcgcacatcaagacc
ggcacgctgcgcgacgtgcgcgcgatcgcgggctacgtggccgccgagaacggttcgagc
tggatcgtcgtgagcctgatcaacgatccgcgcgcggaaggcgcgcgcgccgctcacgat
gcgctgctcgaatgggtctacaagggcatgcccgaggagcatccggtgtatgtcgatccg
catccgcgcaaggcgtcgaaggcgtcgcgcgcgggccacggcgtgagagtcgagcggatc
agcgaatcggtcggccgcaagccggcggaaaaggcgccggaaaaagcatcggaaaaggcg
tcgcccaaagcctcggcgaaggcgcctgcgaagacgtcggccaaggcgtccggcaaggcc
acgaagaagcatcacgccgcgcattga
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