Paraburkholderia tropica: G5S35_12525
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Entry
G5S35_12525 CDS
T07044
Symbol
cpaF
Name
(GenBank) Flp pilus assembly complex ATPase component
KO
K02652
type IV pilus assembly protein PilB
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptro02044
]
G5S35_12525 (cpaF)
02035 Bacterial motility proteins [BR:
ptro02035
]
G5S35_12525 (cpaF)
Secretion system [BR:
ptro02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
G5S35_12525 (cpaF)
Bacterial motility proteins [BR:
ptro02035
]
Pilus system
Pilus assembly proteins
G5S35_12525 (cpaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
AAA_22
AAA_11
nSTAND3
AAA_30
AAA_19
HerA_C
AAA_14
AAA_23
AAA_7
DEAD
AAA
Motif
Other DBs
NCBI-ProteinID:
QNB12914
LinkDB
All DBs
Position
A:2780900..2782225
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AA seq
441 aa
AA seq
DB search
MFSIPHRSRSSNGSHALAAEGLSNGGGGSGNARASLNTPSPAASLDDAPAVRLLADTLRE
AARRNASDLHVEPLEQGWRIRVRIDGVLHEIARPPVHLRDAFVTRVKVLARMDIAERRIP
QDGRLRLAPLAQHASAEDYRVNSLPTLHGEKLVLRRLEALPADLSLAALGLDDTQQHTLG
AAIAAPHGLVLVTGPTGSGKTLSLYCFLQRLNDASRNLCSVEDPAEIQLAGINQVNVREK
AGLTFALALRALLRQDPDVIMIGEIRDEETASVAVKAAQTGHLVLSTLHTNDAPAAVARL
IDIGVEPYNLAAALRLVTAQRLVRRLCPQCRVPSNESEAVLRAAGLEVDARASSLSSPSS
VFAARGCEACHGIGYRGRVGIHEVMPVSASMREMIVGKRSAHEIAHQARAESVATLRDAA
LARVRDGTTSLAEALAATDTP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttttccattcctcatcgttcgcgcagttctaacggttcgcacgcactggccgccgag
ggcctatccaacggcggcggtggcagcggcaacgcgcgcgcgtcgctgaacacgccgtcg
ccggccgcctcgctcgacgacgccccagccgtacgtctgctcgccgacacgctgcgcgaa
gccgcgcggcgcaacgcctccgacctgcatgtcgagccgctcgaacagggctggcgcatt
cgcgtacgcatcgacggcgtgctgcacgagatcgccagaccgcccgtgcatctgcgcgac
gcgttcgtcacgcgggtgaaagtgctcgcgcgcatggacatcgccgagcggcgcattccc
caggatggcaggctgcggctcgctccgcttgcgcaacacgcgtcggccgaagactatcgc
gtgaattcgctgcccacgctgcacggtgaaaaactcgtgctgcggcggctcgaagcgctg
cccgccgatctctcgctcgccgcgctcggcctcgacgacacacagcagcacacgctcggc
gcggccatcgccgcaccgcacgggctcgtgctggtcacgggtcccacaggcagcgggaaa
acgctgtcgctctactgcttcctgcaacggctgaacgacgcttcgcgcaatctctgctcg
gtggaagatcccgccgaaattcagctcgcgggcatcaatcaggtcaacgtgcgcgagaaa
gccgggctcacgttcgcactcgcgttgcgcgcgttgctgcgtcaggacccggacgtcatc
atgatcggcgagattcgcgacgaggagaccgccagcgtcgccgtgaaagcagcacaaacc
ggccacctcgtgctgtccacgctgcacacgaacgacgcgcccgccgcggtcgcacgactg
atcgacatcggcgtggaaccgtacaacctcgccgccgcgctgcgcctcgtcaccgcgcag
cgactcgtgcggcggctgtgtccgcaatgccgcgtgccgtcgaacgagtccgaggcggtg
ttgcgcgcggccggtctcgaagtcgatgcgcgcgcatcgagtttgtcatcgccttcatcc
gtattcgcggcgcgcggttgcgaggcgtgccacggcatcggttatcgcgggcgagtgggc
atacacgaagtcatgccggtgagcgcgtccatgcgcgagatgattgtggggaagcgcagc
gcgcacgagatcgcccatcaggcgcgcgcagaaagcgtcgccaccttgcgcgacgccgcg
ctcgcacgcgtgcgcgacggcaccacgagtctcgccgaagcgctggccgccacggatacg
ccatga
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