Paraburkholderia tropica: G5S35_12790
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Entry
G5S35_12790 CDS
T07044
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S35_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_12790
Enzymes [BR:
ptro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G5S35_12790
DNA repair and recombination proteins [BR:
ptro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5S35_12790
Prokaryotic type
G5S35_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNB12916
LinkDB
All DBs
Position
A:2842489..2843226
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AA seq
245 aa
AA seq
DB search
MSMVSDTPRLEDQFAALPAAWRDLLTPFTASDTYAPLCRFVDDERAAGKTVYPADVFRAL
RLTSPDDVKVVILGQDPYHGDDRGTPQAHGLAFSVPPGVRPPPSLRNMFKEIAASLGIDA
PAHGCLDAWARQGVLLLNTVLTVERANAASHAKRGWERCTDTLIHELATRHQHLVFMLWG
AHAQNKRALLGNGEHCVLEAPHPSPLSAHRGFLGCGHFAQANAYLQAHGRAPIDWRLPEV
GEVLA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggtttccgacaccccgcgcctcgaagatcagttcgccgccctgcccgccgcc
tggcgtgatctgctcacgccgttcaccgcaagcgacacctacgcgccgctgtgccgcttc
gtcgacgacgagcgcgccgccggcaagaccgtctatcccgccgatgtgttccgcgcgctg
cgcctcacctcgcccgacgacgtgaaagtggtgatcctcggtcaggatccgtatcacggc
gacgaccgcggcacgccgcaggcgcacggcctcgcgttttcagtgccgccgggcgtgcgt
ccgccgccgtcgctgcgcaacatgttcaaggaaatcgcggcgagcctcggcatcgacgcg
cccgcgcacggttgtctcgacgcctgggcgcgccagggcgtgctgctgctcaataccgtg
ctgacggtcgagcgcgcgaacgccgcgagccacgccaaacgcggctgggagcgctgcacc
gacacgctcatccacgaactcgccacgcgccaccagcatctcgtcttcatgctgtggggc
gcccacgcgcagaacaagcgcgcgctgctcggcaacggcgagcattgcgtgctggaagcg
ccgcatccgtcgccgctgtcggcgcatcgcggctttctgggctgcggccatttcgcgcag
gccaacgcgtatttgcaggcccacggccgcgcgccgatcgactggcgcttgcccgaggtc
ggcgaagtgctcgcctga
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