Paraburkholderia tropica: G5S35_13225
Help
Entry
G5S35_13225 CDS
T07044
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00300
Lysine biosynthesis
ptro00470
D-Amino acid metabolism
ptro01100
Metabolic pathways
ptro01110
Biosynthesis of secondary metabolites
ptro01120
Microbial metabolism in diverse environments
ptro01230
Biosynthesis of amino acids
Module
ptro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5S35_13225 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5S35_13225 (lysA)
Enzymes [BR:
ptro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G5S35_13225 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
QNB12443
LinkDB
All DBs
Position
A:2933919..2935190
Genome browser
AA seq
423 aa
AA seq
DB search
MTQPAFHRVDGTLFVEGVSAADLAAQYGTPLYVYSRAALSSAWHAYADACAGRRASVHVA
VKANSNLAVLNVFAREGAGFDIVSGGELARVLAAGGKAQNTVFSGVGKHADEMRVALEAG
VKCFNVESIPELDRLNAVAGELGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGIAFEDA
RATYRAAAAMPNLQVVGIDCHIGSQITEVAPYLDAIDKVLELVDQIESDGIAIHHIDVGG
GLGIRYDDETPPDIGAFVRTVLDRIEAHGAKTGKSREVWFEPGRSLVGNAGILLTTVEFL
KPGAEKNFAIVDAAMNDLARPAMYEAYHAIETVATPAGEAKTWDIVGPVCESGDWLGRER
TLAIEPGDVLAIRSAGAYGFAMSSNYNTRPRAAEIMVDGARTHVARERETVPQLFAGEHL
LPD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccgcttttcatcgtgtcgacggcacgcttttcgtcgaaggcgtgtccgcc
gccgacctcgccgcgcagtacggcaccccgctctacgtctactcgcgcgccgcgctcagc
agcgcatggcacgcctacgccgacgcctgcgcgggccgccgcgcgagcgtgcacgtcgcc
gtgaaggccaacagcaatctcgccgtgctgaacgtattcgcgcgcgaaggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggccgccggcggcaaggcgcagaac
acggtgttctcgggcgtgggcaagcatgccgacgaaatgcgcgtggcgctcgaagcgggc
gtgaagtgcttcaacgtcgaatcgattcccgaactcgaccgcctgaacgccgtcgcgggc
gaactgggcaagaaggcgccggtctcgctgcgcgtgaacccggacgtcgacgcaaaaacg
catccgtacatttccacgggcctgaagtcgaacaagttcggcatcgccttcgaagacgcg
cgcgccacctatcgcgcggccgcggccatgccgaatctgcaggtcgtgggcatcgactgc
catatcggctcgcagatcaccgaagtcgcgccgtatctcgacgccatcgacaaggtgctc
gaactcgtcgaccagatcgagtcggacggcatcgcaattcatcacatcgacgtgggcggc
ggtctcggcatccgctacgacgatgaaacgccgccggacatcggcgcgttcgtgcgcacc
gtgctcgaccgcatcgaggcgcatggcgcgaagaccggcaagtcgcgcgaagtctggttc
gagccgggccgctcgctggtcggcaatgcaggcatcctgctgacgaccgtcgaattcctc
aagcccggcgcggaaaagaacttcgcgatcgtcgacgcggccatgaacgatctggcacgc
cccgcgatgtacgaggcgtatcacgcgatcgagacggtcgcaacgccggcgggcgaagcc
aaaacgtgggacatcgtcggtccggtgtgcgagagcggcgactggctgggccgcgaacgc
acgctcgcgatcgagccgggcgacgtgctggcgatccgctcggcgggcgcgtacggcttc
gcgatgagctcgaactacaacacgcgtccgcgtgccgccgaaatcatggtcgacggtgct
cgcacgcacgtcgcgcgcgagcgcgaaacggtgccgcaactgttcgcgggcgagcatctg
ctgccggattga
DBGET
integrated database retrieval system