Paraburkholderia tropica: G5S35_13440
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Entry
G5S35_13440 CDS
T07044
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S35_13440 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptro03019
]
G5S35_13440 (recQ)
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_13440 (recQ)
Enzymes [BR:
ptro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S35_13440 (recQ)
Messenger RNA biogenesis [BR:
ptro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G5S35_13440 (recQ)
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G5S35_13440 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNB12485
LinkDB
All DBs
Position
A:complement(2966544..2968391)
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AA seq
615 aa
AA seq
DB search
MSRSLEILNEVFGYPVFRGQQAEIVEHVAGGGDSLVLMPTGGGKSLCYQIPALVRHEAGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLTGAEAAATERALREGDLDLLYVAPER
LMTSRFLELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIMHRLALDDARVFVSSFDRPNIRYRIVEKDNARTQLLDFIRAEHTRADGTTDAG
VVYCLSRRKVEETAEWLKGQGVRALPYHAGMEFEVRQKHQELFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLAANAWMAYGLGDVVQQRKMIDESDADE
QHKRVQTGKLDALLGLCETATCRRVRLLAYFGEESKPCGNCDTCIEPPATWDATREAQMA
LSCVFRAQRASGFNFGAGHLIDILRGNRNEKIMQRGHEKISTFGIGAALSEAEWRGIFRQ
LVAFGYLTVDHEGFGALVLTEASKAVLKGEQHVTMRRYVKPTRTRTSSSRTSERADPTVG
MSPRQRARWERLRLWRTDTAKSEGVPAYVIFHDATLAEIARNGPESVDDLRDIPGIGARK
LERFGEELVEVVGDE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctcgaaattctcaacgaagtcttcggttatcccgtctttagagggcaa
caagccgagatcgtcgagcatgtcgcgggcggcggcgattcgctggtgctcatgcccacg
ggcggcggcaagtcgctctgctatcagattccggcgctggtgcgccacgaggccgggctc
ggcgccggcatcgtggtctcgccgctgatcgcgctgatgcaggaccaggtggccgcgctg
accgaagtcggcgtgcgcgcggcgtatctgaattcgacgctcaccggcgccgaggcggcc
gccaccgagcgcgcgctgcgcgaaggcgacctcgatctgctctacgtggcgcccgagcgt
ctgatgacgtcgcgctttctcgaactgctcgagcgcacgcgcatcggcctgttcgcgatc
gacgaggcgcactgcgtgtcgcaatgggggcacgatttccgccccgagtacatccagctt
tcggtcctgcacgagcgcttcccgaacgtgccgcgcatcgcgctcacggccaccgccgac
gcgatcacgcgcgacgagatcatgcaccgcctcgcgctcgacgacgcgcgcgtgttcgtg
tcgagcttcgaccggccgaacatccgctaccgcatcgtcgaaaaggacaacgcgcgcacg
caactgctcgatttcatccgcgcggagcacacgcgcgccgacggtacgaccgacgcgggc
gtggtctattgcctgtcgcgccgcaaggtcgaggaaaccgcggagtggctgaaggggcag
ggcgtgcgcgcgctgccgtatcacgccggcatggaattcgaggtgcgccagaagcatcag
gagctgttccagcgcgaagagggtgtggtgatgtgcgcgaccatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcgcatctggacttgcccaagagcgtggaaggc
tattaccaggaaaccggccgcgcgggccgcgacgggctggcggccaatgcctggatggct
tatggccttggcgacgtcgtgcagcagcgcaagatgatcgacgagtccgacgccgacgag
cagcacaagcgcgtgcagacgggcaagctcgacgcgctgctcggcctgtgcgaaacggcc
acctgccggcgcgtgcgtctgctcgcttacttcggcgaggagagcaagccctgcggcaac
tgtgacacctgcatcgagccgcccgccacctgggacgccacgcgcgaggcgcaaatggcg
ctttcgtgtgtgttccgcgcccagcgcgcgagcggcttcaatttcggcgcgggtcacctg
atcgacattctgcgcggcaaccgcaacgagaagatcatgcagcgcggccacgagaagatc
tcgaccttcggcattggcgcggcgctgtccgaggccgagtggcgcggcatcttccgtcag
ctggtggcgttcggctatctgaccgtcgatcacgagggcttcggcgcgctcgtgctgacg
gaggcgagcaaggcggtgctcaagggcgagcagcacgtcacgatgcgccgctatgtgaag
cccacgcgcacacgtacgtcgtcgagccgcaccagcgagcgcgccgatccgaccgtgggc
atgagcccgcgtcagcgtgcgcgctgggagcgtctgcgcctgtggcgcaccgacacggcc
aagagcgaaggcgtgcccgcctacgtgatcttccacgacgccacgctggcggaaatcgcc
cgcaacggtcccgaatcggtcgacgatctgcgtgatattccgggcatcggcgcgcgcaaa
ctcgaacgctttggcgaggaactcgtcgaggtcgtcggcgacgaataa
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