Paraburkholderia tropica: G5S35_14890
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Entry
G5S35_14890 CDS
T07044
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5S35_14890 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_14890 (recC)
Enzymes [BR:
ptro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G5S35_14890 (recC)
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S35_14890 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QNB14490
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All DBs
Position
B:26604..30161
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AA seq
1185 aa
AA seq
DB search
MLVHGNEPERLRDLIVQWIGQHPIAPLEKEMLLVQSNGIAQWLKLAFAADPEDGGCGIAA
ALEMSLPSRFLWQVYRAVLGEDAVPAVSPFDKSRLVWRLMRMLPALLDEPGYEPLKRFMA
NDEEQRKCFQLAQRVADLFDQYQVYRADWLAAWADHDDVLIDARNNRVPLADDARWQAAL
WRALLADVSERAPAGSALAQTGRAAVHDLFMRRAQAWQEGEPRPRGLPRRLVVFGISSLP
RQSLEVLAALARWSQVLLCVHNPCMHYWADIVADQDLLRARHARQRRRAGAPAVLDESQL
HLHAQPLLAAWGKQGRDFIGLLDEYDSDEARETYTPHFTRIGQRIDLFDGADAHTLLQEL
QDDIRDLRPLPETREHWPAVDPQTDESIRFHVAHSAQREVEILHDRLLAAFAADPAMRPR
DVIVMVPDIEIYTPHIQAVFGLVDSDDPRYIPFSVADRAQRAFDPLIGALEMLLALPHGR
VTVSDVLDLLEVPAVRTRFEIDAEDVPTLRNWIDGANIRWGLHAEQRASLGLPHGESGAP
NSWAFGLRRMLLGYAAGDRASAWRGIEPYAEIGGLDAALLGPLTRLIDALDHAWRTLREP
ASVDVWCERLRALKATFFATDEGEDAYTLERLDSALETWRDACSEAELTDALPLAIVAEN
WLGQLDGGGLSQRFFAGAVTFATLMPMRAIPFRYVCLLGMNDGDYPRSRTPLDFDLMRRD
YRPGDRSRREDDRYLFLEALLSAREHLHISWIGRSVTDNTPRPPSVLVGQLRDHIKAGWR
LDSEDGKPDALLDALTIEHRLQPFSADYFPADPRHAPLYTYAHEWSRPAPLASAAADAPT
LPAPERDEPLSVRELAEFLRDPVRSFFRQRLRVALEMQDEASENHEPFEVDALQAWQLQG
ELIRAQVAAMERGETDLEPVARERLERMHRSGDLASGGFGEVIGEELLAPMEELFIEYRK
ALARWPRLRTDQYEIRLDLAREGRTIDVQDWLDDIREGEDGTLGRVILEPGTLVKDNKYR
GERLVAYWVAHVAAQLAVGEVTTVVVSKVGVAEFAPLARETARAWLLALLAAWDEGARRP
LPLAVKTAFAWLRKLPADYDAAAGAVPAEAWEAARTAFEGAARMAGECETNPYVRRAFPD
FDTLIAGDEFATLAATLLLPVQRAPLASSKKKSGAASADNAGDAA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcacggcaacgagcccgaacggctgcgcgacctgatcgttcagtggatcggt
cagcatccgatcgcgccgctcgaaaaggaaatgctgctggtgcagagtaacggcatcgcg
cagtggctcaagctcgcgttcgccgccgatcccgaggacggcgggtgtggcatcgcagcg
gcgctggaaatgtcgctgccgtcgcgttttctctggcaggtgtatcgcgcggtgctgggc
gaggacgcggtgccggccgtctcgccgttcgataaatcgcgcctcgtctggcggctgatg
cgcatgctgcccgcgctgctcgacgagccgggctacgagccgctcaagcgcttcatggcc
aacgacgaggaacagcgcaagtgttttcagctcgcgcaacgcgtggccgacctgttcgac
cagtaccaggtgtatcgcgccgactggctcgctgcgtgggccgatcacgacgacgtgctg
atcgacgcgcgcaacaaccgcgtgccgctcgccgacgacgcgcgctggcaagccgcgctc
tggcgcgcgctgctcgccgacgtgagcgagcgcgcgcctgcgggtagcgcactcgcgcaa
accggccgggcggcggtgcacgatctcttcatgcgccgcgcgcaggcgtggcaggaaggc
gagccgaggccgcgtggcctgccgcgccgcctcgtggtgttcggcatttcgagtctgccg
cgccagtcgctcgaagtgcttgcggcgctcgcgcgctggagccaggtgctgctctgcgtg
cacaacccgtgcatgcactactgggccgatatcgtcgccgaccaggatctgctgcgcgcg
cgtcacgcgcgtcagcgccgccgcgcgggcgcgcccgccgtgctcgacgaatcgcaactg
catctgcacgcgcaacccttgctggcggcgtggggcaagcaggggcgcgacttcatcggc
ctgctcgacgaatacgacagcgacgaagcgcgcgaaacctacacgccgcatttcacgcgc
atcggtcagcgtatcgatctgttcgacggcgccgacgcgcacacgttgctgcaagaactg
caggacgatattcgcgatctgcgtccgctgccggagacgcgcgagcattggcccgccgtc
gatccgcagaccgacgagtcgatccgctttcacgtcgcgcacagcgcgcagcgcgaagtg
gagatcctgcacgaccgtctgctcgcggcgttcgcggccgaccccgcgatgcggccgcgc
gacgtgatcgtgatggtgcccgacatcgagatttacacgccgcatattcaagccgtgttc
ggtcttgtcgatagcgacgatccgcgctatatcccgttcagcgtcgcggaccgcgcgcag
cgcgcattcgatccgttgatcggcgcgctcgaaatgctgctcgcgctgccgcacggacgc
gtcaccgtgagcgacgtgctcgatctgctcgaagtgcccgccgtgcgcacgcgcttcgag
atcgacgcggaggatgtgccgacgctgcgcaactggatcgatggcgcgaatatccgctgg
ggtttgcatgccgaacagcgcgcgagcctcggcctgccgcatggcgaaagcggcgcgccg
aacagttgggctttcgggctgcgccggatgctgctcggttatgcggccggcgatcgtgcg
agcgcgtggcgcgggatcgagccgtatgcggaaatcggcgggctcgacgcggccttgctc
ggcccgcttacacgcctgatcgacgcactcgaccacgcatggcgcacgctgcgcgaaccg
gcgagcgtggacgtctggtgcgagcgtctgcgcgcgttgaaggccaccttcttcgccacc
gacgaaggcgaggacgcgtacacgctcgaacgcctcgacagcgcgctcgaaacgtggcgc
gacgcgtgcagcgaagccgaactcacggacgcgctgccgctcgccatcgtcgccgaaaac
tggctcggccagctcgacggcggcggcctttcgcagcgctttttcgcaggcgcggtgacc
ttcgccacgctcatgccgatgcgcgcgattccgtttcgctacgtctgtctgctcgggatg
aacgacggcgattatccgcgcagccgcacgccgctcgacttcgacctgatgcggcgcgac
tatcgtcccggcgaccgttcgcgccgcgaggacgaccgctatctgtttctcgaagcgctg
ctgtccgcacgcgagcatctgcatatctcgtggatcggccgcagcgtgaccgacaacaca
ccgcgtccgccttcggtgctggtcgggcagttgcgcgatcacatcaaggcgggctggcgg
ctcgacagcgaagacggcaagcccgacgcgctactcgacgcgctcacgatcgaacatcgg
ttgcagccgttcagcgccgactactttccggccgatccgcgtcacgcgccgctgtacacc
tatgcgcacgaatggagccgtcccgcgccgctggcgagcgccgcggccgacgcgccgacg
ctgcccgcgcccgagcgcgacgagccgctttcggtgcgtgaactcgcggagtttcttcgc
gatccggtgcgcagcttctttcgtcagcgtttgcgcgtggcgctcgaaatgcaggacgaa
gcgagcgagaaccacgagccgttcgaagtggatgcattgcaggcgtggcagttgcagggc
gaactgattcgcgcgcaggtggcggcgatggagcgcggcgaaaccgatctcgaaccggtc
gcgcgcgaacggctcgaacgcatgcatcgcagcggcgatctcgcgagcggcggcttcggc
gaagtgatcggcgaggaactgctcgcgccgatggaagaactgttcatcgaatatcgcaag
gcgctcgcgcgctggccgcgtctgcgtaccgatcaatatgaaattcgtctggatctcgcg
cgcgaaggtcgcacgatcgacgtgcaggattggctcgacgatattcgcgaaggcgaggac
ggcacgctcgggcgcgtgattctcgaacccggcacgctcgtgaaggacaacaagtatcgc
ggcgaacggctcgtcgcatactgggtcgcgcacgttgcagcgcaactcgcggtgggcgaa
gtgaccacggtcgtggtgagtaaggtgggcgtggcggagttcgcgccgctcgcgcgcgag
actgcgcgcgcgtggttgctcgcgctgctggcggcgtgggacgaaggcgcgcggcggccg
ttgccgctcgcggtgaaaacggccttcgcctggctgcgcaaattgccggcggactacgac
gcggcggcgggcgcggtgcccgccgaagcgtgggaagcggcgcgcacggccttcgagggc
gcggcgcgcatggcgggcgagtgcgagacgaatccgtacgtgcgccgcgcatttcccgac
ttcgacacgctgatcgcaggcgacgaattcgcgacgctcgcggccacgttattgctgccg
gtgcagcgcgcgccgctcgcttcatcgaagaagaaaagcggcgccgcgtctgccgacaac
gcaggagacgccgcatga
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