Paraburkholderia tropica: G5S35_14900
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Entry
G5S35_14900 CDS
T07044
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5S35_14900 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_14900 (recD)
Enzymes [BR:
ptro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G5S35_14900 (recD)
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S35_14900 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
SH3_13
Helicase_RecD
UvrD-helicase
T2SSE
SLFN-g3_helicase
AAA_28
NTPase_1
nSTAND3
TraI_hel_assoc_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QNB14492
LinkDB
All DBs
Position
B:34246..36348
Genome browser
AA seq
700 aa
AA seq
DB search
MLATLDRWVERGWLRTLDGAFARFLLDETPDAPPLLLLAAALASHQLGRGHVCLDLQATL
DDPAFALSLPPDGPQTPTAEPPQPPAEVLAGVTLERWRAALDAPELVGHAQADGHDSTQA
SVQDSTPLVLAGNRFYLRRYWQYEQDVRAGIEARLARGPRLEAALPAAAARAALDALFAP
RSASAKGADWQKLACALAARSAFSIITGGPGTGKTTTVVKLLALLQTLALDPDGTGGRPL
RIRLAAPTGKAAARLNESIAGAVERLPFDALAQRVDPAALRSAIPTVVTTLHRVLGTRPG
SRRFRHDAGNPLPVDVLVIDEASMVDLEMMAAVLDALPSNARLILLGDKDQLASVEAGAV
LGELCERARDGHYTEATRAWLEAATGERIDAAMLDTHGTPLDQAVAMLRESHRFASESGI
GALAELVNAGDATGVAKIWTRGYADLARLICPAGDDAPLRALITDGVVNEEAGGGSSAPA
TQRRGYRHYLHTMRALRPEAGASPEALAKWASAVLQAHTQFQLLCALRRGTWGVEGLNRR
VARLLQEDGLIDPLGDWYAGRPVLVTHNDYELGLMNGDIGIALDLPVEAGAPPVLRVAFP
SGDGAGGVKWVSPSRLQGVETVFALTVHKSQGSEFTHAALVLPDTYSPILTRELVYTGIT
RARTWFTLAVPEGRSVLERAVCARVQRASGLMAALFDDAR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgacgctcgatcgctgggtggagcgcggctggctgcgcacgctcgacggcgcg
ttcgcgcgctttctgctcgacgagacgcccgatgcgccgccgctgttgctgctcgccgcc
gcgctcgcgagtcatcagttggggcgcggccatgtgtgtctcgacttgcaggcgacgctc
gacgatcccgccttcgcgctctcgttgccgcccgacggtccgcaaacgcccacggccgag
ccgccgcagccgcccgccgaagtgctcgcgggggtgacgctcgagcgctggcgcgcggcg
ctcgacgcgccggaactggtcgggcacgcgcaagccgatgggcacgacagcacgcaagcc
agcgtgcaagacagcacgccgctcgtgctggccggcaatcgtttctatctgcgccggtac
tggcagtacgagcaggacgtgcgcgcgggtatcgaagcgcggcttgcgcgcggaccgcgt
ctcgaagcggcgctgcccgccgcggcggcgcgcgcggcgctcgacgccttgttcgcgccg
cgttcggcatcggcaaaaggcgcggactggcagaaactcgcgtgcgcgctcgcggcgcgc
agcgcgttcagcatcatcacgggcggacccggcacgggcaagacgaccaccgtcgtcaaa
ttgctggcgctgctgcaaacgctggcgctcgatccggacggcacaggcggacgcccgctg
cgcattcgcctcgccgcgccgacgggcaaggccgccgcgcgcctgaacgaatcgatcgcg
ggcgccgtcgaacgattgccgttcgacgcgctcgcgcagcgcgtcgatccggctgcgctg
cgcagcgcgattccgactgtcgtgaccacgctgcatcgcgtgctcggcacgcggcccggc
agccggcgttttcgtcacgatgcgggcaatccgctgcccgtcgacgtgctcgtgatcgac
gaagcgtcgatggtcgatctggagatgatggccgcggtgctcgatgcgttgccgtcgaat
gcgcgtctgatcctgctcggcgacaaggaccagctggcctcggtcgaagcgggcgcggtg
ctcggcgaactttgcgagcgcgcgcgcgacggccactacacggaggcgacgcgcgcatgg
ctcgaagcggccacgggcgagcgcatcgacgccgccatgctcgatacgcacggcacgccg
ctcgatcaggccgtggcgatgctgcgcgagagccatcgtttcgcatcggaaagcgggatt
ggcgcgctggcagaactcgtcaacgcgggcgatgccacgggcgtggcgaagatctggacg
cgcggctatgcggatctcgcgcgcctcatctgtccggcgggcgacgacgcgccgttgcgc
gcgctgatcaccgacggcgtggtgaacgaagaagcgggcggcggcagcagcgcgcccgcc
acgcagcgccggggctatcggcattatctgcacaccatgcgtgcgttgcgtccggaagcg
ggcgcgtcgccggaagcgctggcgaagtgggcatcggcggttttgcaggcgcatacgcag
ttccagttgctgtgcgcgttgcgacgcggcacttggggcgtggaggggcttaatcggcgc
gtcgcgcggttgctgcaggaagacggtctgatcgatccgctcggcgactggtatgcgggg
cggcccgtgctcgtcacgcataacgactacgagcttgggctgatgaacggcgatatcggc
attgcgctcgatctgcccgtggaagcgggcgcgccgccggtgctgcgcgtggcgttcccg
tcgggcgatggcgcgggcggcgtgaagtgggtgtcgccgagccgcctgcaaggcgtcgag
accgtgttcgcgctgaccgtgcacaagtcgcagggttcggaattcacgcacgcggcgctc
gtgctgcccgatacgtacagtccgattctcacgcgcgaactcgtctacacgggcatcacg
cgcgcgcgcacgtggttcacgctggccgtgccggaagggcgctcggtgctggagcgcgcg
gtttgcgcccgcgtgcagcgcgcgagcggcttgatggcggcgctattcgacgacgcgcgc
tga
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