Paraburkholderia tropica: G5S35_22640
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Entry
G5S35_22640 CDS
T07044
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00260
Glycine, serine and threonine metabolism
ptro01100
Metabolic pathways
Module
ptro_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5S35_22640
Enzymes [BR:
ptro01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
G5S35_22640
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
G5S35_22640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
HI0933_like
FAD_binding_2
DAO
FAD_binding_3
AlaDh_PNT_C
Pyr_redox
NAD_binding_7
Thi4
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QNB14339
LinkDB
All DBs
Position
B:1765991..1768999
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AA seq
1002 aa
AA seq
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MSQKNRLGAGGRINRAIPLTFTFNGRTYQGYQGDTLASALLANDVHFVARSFKYHRPRGI
VTADVAEPNAVVQLERGAHTVPNARSTEIELYQGLVANSVNAEPNLENDRMAINQKFSRF
LPAGFYYKTFMWPRKWWPKYEEKIRDAAGLGKSPEVRDGDRYDKCFAHCDVLVIGGGPTG
LAAAHTAALSGARVMLIDDQRELGGSLLGCKAEIDGKPALQWVEKIEAELAAMPDVKILS
RSTAFGYQDHNLVTVAQRLTEHLPVSTRHGTRELLWKIRAKRVILATGAQERPVVFGNND
LPGVMLASAVSTYLHRYGVIPGRNAVVFTNNDAGYRCALDLKACGANVTLVDSRTQGSGA
VQSAARRQGVKVMNNAAIMTAHGKLRVNAVDVVAYANGKTGAKQATIPCDLVAMSGGLSP
VLHLFAQSGGKALWNDTKACFMPGKRVQPEVSVGAAVGEFSLARGLTLAVDAGLDAAQSL
GFKLARPNVPKVAELSESPLEPLWLVGSRTEASRGPKQFVDFQNDVSAADILLAAREGFE
SVEHVKRYTAMGFGTDQGKLGNINGMAILAAALGKTIPETGTTTFRPNYTPVTFGTFAGR
ELGDFFDPVRKTCVHEWHVEHGALFEDVGNWKRPWYFPKGGEDLHAAVKRECLAVRNGVG
ILDASTLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLGP
QHYMMTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVLQKVCG
DIDFENAAFPFMSYRNGTVAGVKSRVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEF
DITPYGTETMHVLRAEKGYIIVGQDTDGSVTPFDLGMGGLVSQTKDFLGRRSLKRSDTAK
EGRKQFVGLLTDDPQFVLTEGSQIVDENARARNDGTTPMLGHVTSSYQSPILDRSIALAV
IKGGLDRMGERVVIPLADGRRVGAKIVSPVFYDIEGVRQHVE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagaaccgcctcggcgccggtgggcgcatcaaccgcgcgattccgctgacg
ttcacgttcaacggtcgcacgtatcagggttatcagggcgacacgctcgcttccgcgctg
ctcgcgaacgacgtgcatttcgtggcgcgcagtttcaaataccaccgtccgcgcggcatc
gtcacggcggacgtggccgagccgaatgccgtcgtgcaactcgagcgcggcgcgcatacc
gtgccgaatgcgcgctcgaccgagatcgagttgtatcaggggctggtggcgaatagcgtg
aacgccgaaccgaacctcgaaaacgatcgcatggcgatcaatcaaaagttctcgcgcttt
ttgcccgcgggcttttactacaagacgttcatgtggccgcgtaaatggtggccgaaatac
gaagaaaagattcgcgatgcggcgggtctcggtaaatcgcctgaagtgcgtgacggcgat
cgttacgacaagtgtttcgcgcattgcgacgtgctcgtgatcggcggcggcccgacgggt
ctggcggccgcgcacacggccgcgttgagcggcgcgcgcgtgatgctgatcgacgatcag
cgcgaactcggcggcagcctgctcggctgcaaggcggagatcgacggcaagcccgcgctg
caatgggtcgaaaagatcgaagccgaactggccgccatgccggacgtgaagattctctcg
cgcagcacggcattcggctatcaggatcacaatctcgtgaccgtcgcgcaacggttgacc
gagcatctgccggtgtccacgcgtcacggcacacgcgaactgctgtggaagattcgtgcg
aagcgcgtgattctcgccaccggcgcgcaggagcgtccggttgtattcggcaataacgat
ttgccgggcgtcatgctcgcgtcggcggtatcgacttatctgcatcgctatggcgtgatt
ccgggccgtaatgcggtggtgttcacgaataacgacgcgggctatcgttgcgcgctcgat
ctcaaggcgtgcggtgcaaacgtgacgctcgtcgattcgcgcacacaaggcagcggcgca
gtgcaaagtgccgcgcgccgccagggcgtgaaggtgatgaacaatgccgcgatcatgacg
gcgcacggcaaactgcgcgtgaatgccgtggacgtggtcgcgtatgcgaacggcaaaacc
ggcgcgaagcaggcaacgattccgtgcgacctcgtggcgatgtcgggcggcttgagcccc
gtgctgcatctgttcgcgcaatcgggcggcaaggcgctctggaacgacacgaaagcgtgt
ttcatgccgggcaagcgcgtgcagcccgaagtcagcgtgggcgcggcggtcggcgaattc
agtctggcgcgcggcctgacgctcgcggtcgatgccgggctcgacgcggcgcaaagtctc
ggcttcaagctcgcgcgtccgaatgtgcccaaggtggcggaattgagcgaatcgccgctc
gagccgctgtggctcgtcggcagccgcacggaagcgtcgcgcggcccgaagcagtttgtc
gatttccagaatgacgtttcggcggccgatattctgctggccgcgcgcgaaggatttgaa
tcggtcgaacacgtcaagcgttatacggcgatgggtttcggcaccgatcagggcaagctc
ggcaatatcaacggcatggcgattctcgcggcggcgctcggcaaaacgattccggaaacc
ggcacgacgacgttccgcccgaattacacgccggtgacgttcggcacctttgcgggccgc
gaactcggggactttttcgatccggtgcgcaagacctgcgttcacgaatggcacgtcgag
cacggcgcgttgttcgaggacgtgggcaactggaaacgcccgtggtatttcccgaagggc
ggcgaagatcttcacgcggcggtgaagcgcgaatgtctcgcggtgcgtaatggcgtcggc
atactcgacgcgtcgacgctcggcaaaatcgatattcaaggaccggacgcggcgaaactg
ctcaactgggtgtatacgaatccgtggagcaaactcgaagtcggcaaatgccgctatggc
ctcatgctcgatgaaaacggcatggtgttcgacgacggcgtgacggtgcgcctcggcccg
cagcattacatgatgacgaccacgaccggcggcgcggcgcgcgtgctcacgtggctcgaa
cgctggctgcaaacggaatggcccgatatgaaggtgcggctcgcttccgtgaccgatcac
tgggcgaccttcgcggtggtcggcccgaagagccggaaggtgctgcaaaaggtttgcgga
gatatcgacttcgagaatgcggcgtttccgttcatgtcgtatcgcaatggtacggtcgcg
ggcgtgaaatcgcgcgtcatgcgcatcagcttctcgggcgaactcgcttatgaagtgaat
gtgccggcgaatgcggggcgcgccgtgtgggaagcgttgatggccgcgggcgccgaattc
gacatcacgccttatggcacggaaacgatgcacgtgctgcgggcggagaagggttacatc
atcgtcggccaggacaccgatggttcggtgacgccgttcgatctcggcatgggcggtctg
gtttctcaaaccaaggacttcctgggccgccgctcgctcaagcgttccgatacggcaaaa
gaagggcgtaagcagttcgtcggtctgctcaccgacgatccgcaattcgtgctgaccgaa
ggcagccagatcgtcgacgaaaacgcgcgcgctcgaaacgacggcacgacgcccatgctc
ggtcatgtcacgtcgagttatcagagcccgatactcgatcgctcgattgcgctcgcggta
attaaaggcggtttggacaggatgggcgaacgcgtggtgattccgctcgccgatgggcgg
cgtgtgggcgcgaagattgtcagcccggttttctacgacatcgaaggggtgcgtcagcat
gtggaatga
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