Paraburkholderia tropica: G5S35_22720
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Entry
G5S35_22720 CDS
T07044
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ptro
Paraburkholderia tropica
Pathway
ptro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G5S35_22720 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptro02000
]
G5S35_22720 (choW)
Transporters [BR:
ptro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
G5S35_22720 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DPM3
Motif
Other DBs
NCBI-ProteinID:
QNB14355
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All DBs
Position
B:1787060..1787956
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AA seq
298 aa
AA seq
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MSEIIPLGRWVDQSVHYLLDHDANSFDAVGKAIESFAAFIEHGLQAIPMWALMAFFIAVG
LWRVGWRFAMFATASLLLIYATGFWDQTVVTLGLTLSSTLISLVVGIPLGIWTAKNKLVQ
TIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRLTSLGIKHVNREI
VEAGQAFGCTPWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAGGLGNDVLAS
IQRLDIGLGFESGLSVVLLAIMLDRITESFGRAPGAVRAPLFSGIKQLFRPRPMIAEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatcattccccttggccgctgggtcgatcagtcggttcattatctgctcgat
catgacgcgaatagtttcgacgccgtcggcaaggccatcgagagctttgccgcgtttatc
gagcacggcttgcaggccattcccatgtgggcgctgatggcgttcttcattgctgtcggc
ctgtggcgcgtgggctggcgtttcgccatgttcgctacggcgtcgctattgctgatctac
gcgaccggcttctgggatcagaccgtcgtcacgcttgggctgacgttgtcgtcgacattg
atcagtctcgtggtcgggattccgctcggtatctggaccgcgaagaacaaactcgtgcaa
accatcgtgcggccgattctcgacctgatgcaaacgatgccggcttttgtttatctgatt
cccgctgcgatgctgtttggtcttggccgcgtgccgggcattctctccacggtgatcttc
gcgatgccgccggccgtgcggctcacgagcctcggcatcaagcacgtgaaccgcgaaatc
gtggaagccggtcaggcattcggctgcacgccgtggcaactgctttacaaggtgcagttt
cccaatgcgctgccgtcgatcatgcaaggtgtgaaccagacgatcatgatggcgctgtcg
atggtgatcatcgcgtcgatggtgggcgcgggcggtctcggcaacgacgtgctggcgagt
attcaacgcctcgatatcgggctcggtttcgagagcggtttgtcggtcgtgctgctcgcc
atcatgctagaccggattaccgagagctttggccgcgcacccggcgccgtgagagcgccg
ctgttctccggcatcaagcaactgtttcgtccgcggccgatgattgccgaggcttga
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