KEGG   Paraburkholderia tropica: G5S35_23465
Entry
G5S35_23465       CDS       T07044                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
ptro  Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:ptro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptro02044]
    G5S35_23465 (tssC)
Secretion system [BR:ptro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S35_23465 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QNB14637
LinkDB
Position
C:complement(2647..4152)
AA seq 501 aa
MQTQQATTSSKSAGGAVQTQSDFSQLLAQEFRPKTETARSAVELAVQTLAEQALHQSVTI
SDDAYKSIEAIIAEIDRKLSTQINLIIHHGDFQRLESGWRGLHHLVSNTETDERMKIRFM
DVSKDDLRRTMKRHKGLAWDQSPFFKQIYEEGYGQLGGEPYGCLVADYYFDHTPPDVDLL
GSIAKIAAAAHTPFISGASPSVLQMESWQELANPRDLTKIFSQNLEYAPWNSLRNTEDAR
YIGLAMPRFLSRLPYGVSTNPVDEFDFEEDTDGSDHRNYAWANAAYAMAVNINRSFKLYG
WCSLIRGVESGGTVDNLPCHTFPTDDGGVDMKCPTEIAISDRREAELSKNGFIPLVHRKN
TDHATFIGAQSMQKPAEYADPDATANAALSARLPYLFACSRFAHYLKCIVRDKIGTFRER
EDMQRWLNEWIMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYAAKFFLRPHFQ
LEGLTVSLRLVARLPSVKEAA
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgcaaacccagcaggccaccacttccagcaaaagcgccggcggcgcagtacagacccag
agcgatttctcgcaactgctagcgcaggaattccgtcccaagaccgagacggcgcgcagc
gccgtcgagcttgccgttcagacgcttgccgagcaggcactgcatcagtccgtcacgatc
agcgacgatgcgtataagagcatcgaggccatcatcgcggaaatcgaccgcaagctttcc
acgcagatcaatctgatcatccaccacggtgatttccagaggctcgaatcgggttggcgc
ggcctgcatcatctcgtctcgaacaccgaaaccgacgagcgcatgaagatccgcttcatg
gacgtctcgaaggacgatctgcgtcgtacgatgaagcgccacaagggcctggcatgggat
caaagcccgttcttcaagcagatctacgaagaaggctacggtcaactcggcggcgagccg
tatggctgcctcgtggcggactactatttcgaccatacgccgcccgacgtcgatctgctc
ggttcgatcgccaagatcgccgccgccgcacatacgccatttatttccggcgcatcgccc
tcggtgctgcagatggaatcgtggcaggaactggcgaacccgcgcgacctcacgaagatc
ttctcgcagaatcttgagtacgcgccgtggaactcgctgcgcaatacggaagacgcgcgc
tacatcggtctggcgatgccccgcttcctctcgcgtctgccctacggcgtgtcgaccaac
ccggtcgacgagttcgacttcgaggaagacaccgacggttcggaccatcgcaactacgcg
tgggccaacgccgcctacgcgatggccgtgaacatcaaccgcagcttcaagctgtatggc
tggtgctcgctgatccgcggcgtcgaatctggcggtacggtcgacaacctgccctgccat
acgttcccgaccgacgacggcggcgtcgacatgaagtgtcccaccgaaatcgcgatatcc
gatcgccgcgaagccgagctctcgaagaacggtttcattccgctcgtgcatcgcaagaac
accgatcacgcaacgttcatcggcgcccagtcgatgcagaagcccgccgagtatgccgac
cccgacgccacggccaacgctgccctctcggcgcgcctgccgtacctcttcgcctgctcg
cgctttgcgcattacctcaagtgcatcgtgcgcgacaagatcggcacattccgcgagcgc
gaggacatgcagcgctggctcaacgaatggatcatgaactacgtcgacgcggacccggcg
aactcgtcgcaggaaaccaaggcgcgccgtccgctcgccgcggccgaagtggtggtcgag
gacgtggaaggcaatcccggctactacgcggcgaagttcttcctgcgcccgcacttccag
ctcgagggcctcacggtgtcgctgcgactcgtcgcacgtctgccgtccgtgaaagaagcc
gcctga

DBGET integrated database retrieval system