KEGG   Paraburkholderia tropica: G5S35_23475
Entry
G5S35_23475       CDS       T07044                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
ptro  Paraburkholderia tropica
Pathway
ptro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ptro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G5S35_23475 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptro02044]
    G5S35_23475 (tssH)
Secretion system [BR:ptro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S35_23475 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 AAA_7 Clp_N Zeta_toxin Sigma54_activat nSTAND3 NACHT TniB ResIII NBD_SMAX1 nSTAND_NTPase5 AAA_25 AAA_14 RuvB_N AAA_6
Other DBs
NCBI-ProteinID: QNB14639
LinkDB
Position
C:complement(4818..7595)
AA seq 925 aa
MTISRQALFGKLGATLFRSIESATSFGKLRGNPYVELVHWVHQLLQLPDSDLHRIVRHAG
IERDALERDIARMLAVLPAGASTIDLSTLIEAAVERAWVLATLEFNEQRIRGAWLFAALA
GSPELRRHLTSISPQFNRLPADNPGETFRTWVIDSPEAADSVTLDQAFGSAAPGEASQAI
SASGKTNPLEQYCSDLTARARAGEIDPVTGRETENHTLIDILLRRRQNNPLLTGEAGVGK
TAVVEGLALAIANGNVPPALSSVRLMTLDVGALLAGASMKGEFESRLKGVIEAAIKSPAP
IILFVDEFHTLVGAGGQAGTGDAANLLKPALARGGIRMIGATTWSEYKRHIEKDPALTRR
FQVLQVAEPQEAAAIDMVRSLAGAFASHHGVVVRDEAIRAAVLFSHRYIPSRQLPDKAIS
LLDTACARVALSQHAVPRELDHVRQRLRAAQVEMDLLSQEARIGLDAGAAVVAIQARIDT
LALEEAAIAARWDAQRAAAQALVDARGAVLAHGGAIDASAIASGAGTIHEVPAPEAPPSR
ETLQALKSTLRDLQGELPLVFPEVDEAIVAEIVSDWTGIPVGRMVTDELATVRNLPDMLQ
ARVIGQTEALRQIAERVQTARAGLSDPKKPLGVFLLAGPSGVGKTETALAVAEALYGGEQ
NTIVINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHHDVH
EMFFQVFDKGYMEDGDGRYIDFRNTTILLTSNAASELTASLCADASLAPDQEQLRHALAP
ELLKTFPAAFLGRVTVVPYRPLADDSLASIVRLHLERVVRRMADVHGIALTYDDAVVEYV
VAHCLVQVTGARVLIGFIEQHILPRLASLWLDALSAKCTPTGVHVAIADAQAAPADAFAF
GQSHTSDASTDHSPAVPVVPVGPAD
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgacgatttcccgccaggcgttattcggcaagctcggggccaccctctttcgcagcatc
gaatccgccacctcgttcggcaagctgcgaggcaatccgtacgtggagctcgtccactgg
gtgcatcagctgctgcagctgcctgacagcgacctgcatcgcatcgtgcgccacgccggc
atcgagcgcgatgcgcttgaacgcgacatcgcacgcatgcttgccgtcctgcctgccggt
gccagcaccatcgatctgtctaccctgatcgaggccgcggtcgagcgcgcatgggtgctt
gccacgcttgagttcaacgagcaacgcattcgcggtgcctggctatttgcagcacttgcc
ggctcccccgaactgcgccggcatctcacctcgatctccccgcaattcaaccgtctgccc
gcggacaatccgggggagacgtttcgtacctgggtgatcgactcgcccgaggcggccgac
agcgtaacgctcgatcaggcctttggcagcgccgcacccggcgaagcgtcacaggcgatt
tccgcttcaggcaagacaaatcctcttgagcaatattgctccgacctcacggcgcgcgcg
cgtgccggtgagatcgatcccgttaccggtcgcgaaacagaaaaccacacactcatcgac
attctgttgcggcgcaggcagaacaatcccctgttgaccggtgaagccggcgtgggcaag
acagccgtcgtcgagggacttgcgcttgccatcgcaaacggcaacgtgccccctgcactc
agtagcgtgcggctcatgacgctagatgttggtgccctgctcgcaggcgcgagcatgaag
ggcgaattcgagtcgcgcctgaaaggcgtcattgaggcggctatcaagtcgcccgcgccc
atcattctgtttgtcgacgaattccacacgcttgtgggtgcaggcggtcaggctggcacc
ggcgacgcggcgaacttgctcaagcccgcccttgcgcgcggcgggattcgcatgatcggg
gcgacaacgtggtccgagtacaagcgccatatcgagaaagacccggcactcacgcgccgc
tttcaggtgcttcaggtggccgagccacaggaggctgcagccatcgacatggtgcgctcg
ctcgcaggtgcgtttgcctcccatcacggcgtcgtcgtgcgcgatgaagccatccgcgca
gcggtcctgttctcgcatcgctacattccatcgcgccaactccccgacaaggcaatcagc
ctgcttgacacggcttgcgcgcgcgtggcgctctcccagcacgccgtaccgcgcgagctc
gaccatgtgcgtcagcgcctgagagccgcgcaggttgaaatggatctgctctcgcaggag
gcacgcatcgggctcgacgccggggcggccgtggtggccatccaggcgcgaattgacacg
cttgcgctcgaggaagcggccatcgccgcgagatgggacgcacagcgcgcggcggcgcag
gctctggtcgatgcccgcggcgcagtgcttgcccacggcggcgcgatcgacgcttcggcc
attgcgtcgggcgccggaacgattcacgaggtgccggcgcctgaggctccgccctcgcgc
gaaaccctccaggcgctcaaaagcaccctgcgcgatctgcagggtgaactcccgctcgtg
ttccccgaagtggacgaagcaattgtcgcggaaatcgtctcggactggacgggcattccg
gtcggccggatggtgaccgatgaactggccaccgtgcgcaatcttccggacatgctgcag
gcccgcgtgatcggtcagacagaggcgctgcgccagattgccgagcgcgtgcagaccgcg
cgcgccggcctgagcgatccgaagaagccgctgggtgtcttcctcctcgccgggccgtcc
ggcgtcggcaagaccgagaccgcgcttgcggtggccgaagcgctctacggcggcgagcag
aacaccatcgtgatcaacatgagcgagtaccaggaggcccacaccgtctccgggctcaag
ggcgcgccgccgggttacgtcggctatggcgaaggcggcgtgctcaccgaggcggtccgc
cgtcgaccgtattcggtagttctgctcgacgagatcgagaaggcgcaccacgacgtgcac
gagatgttcttccaggttttcgacaaggggtacatggaagacggcgacggtcgctacatc
gattttcgcaatacgacgatcctgcttaccagcaatgcggcgtcggagctcaccgccagt
ctgtgtgccgatgcctcgctcgcgcccgatcaggaacagctgcgccacgcgctggcgcct
gaactgctcaagacttttcccgcggcgtttctcggacgcgtcacggtcgtgccctatcgc
ccgcttgccgacgactcactagcgagcatcgtacggctgcatcttgagcgcgtggtacgg
cgcatggccgacgttcacggtatcgcgctcacctatgacgacgcggtcgtggaatacgtc
gtggcgcactgcctcgtacaggtgacgggcgcgcgcgtactgatcggctttatcgagcag
cacatcctgccgcgtcttgcgtcgctctggctcgacgccctgtctgcgaagtgtacgcct
acgggtgtgcatgtcgcgatcgccgacgcgcaggcagcgcccgcggacgcatttgctttt
gggcagagccacacgagtgatgcgtcaaccgatcactctcccgccgttcctgtcgtaccc
gtcggcccggccgactga

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