Paraburkholderia tropica: G5S35_25035
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Entry
G5S35_25035 CDS
T07044
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
G5S35_25035
Enzymes [BR:
ptro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
G5S35_25035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
Motif
Other DBs
NCBI-ProteinID:
QNB14913
LinkDB
All DBs
Position
C:complement(338324..340360)
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AA seq
678 aa
AA seq
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MTPMMTFPHSLRPRRAGLSSLLFAALALFAATAHADDAPVTVSEDAGTITLDNGIVEIRV
ERDDGYLAAIRQHDATGWHDLGVTAQRAAYEAHGDDFENDPEKAMYWDANADVAVVPPGY
KEDKKGYFRMRPGEAQVSVVANTPERAEVSVRSRPTAVFPFDIDVRYTLLRGHSGFYAQA
EVHHGADQPAATFYQNRFVVKTVMDGTFDHWAVGDSKFVPIPQGAISRELSDATFQLDDG
TIKTKYMNSVFWSQVPVYGYVGAQRGLWMIEASPEYHNGGPVKQGQTLHDNVLLRVLQSV
HFGASAVVLKDGEDWRKVYGPFLVYANRADGPAALWADAERQHAREVAAWPYTWVDTPAY
RQTRGEVSGSVSLANDASKLASRPASKPVTHAWAILSDPGVPWSAQNKGYAFWSALDDAG
HFDLHNVIPGVYDLHVSGADQPEDLVVHNVRVGADQHLDLGAITWPVEEPGVRLWQIGRF
DRSAAEFRNGDDARNYQMFRRYPKQFPHDVDFVIGKSDPARDWNYAQWTVYAERPDWRIH
FDLSRAQSGKATLTIGFASAQPEQGKTLTDLRVAVNGTEVAQIRLPKTGTAGYRGSAQDS
PYNVRAIVFDAALLKAGENTVSLYHADGVPYARFTLAGSDQRVPANTTPGQVMYDALRLD
VDTYADKNADKNAAASNP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatgatgaccttcccgcattccctccgcccgcgccgtgcgggcctttcctct
ttgctgttcgccgcgctcgcgctgttcgccgcaacggcgcatgccgacgacgcccccgta
acggttagcgaagacgccggcacgatcacgctcgacaacggcatcgtggagatccgcgtc
gagcgcgacgacggctatctcgccgcgatccgtcaacacgacgccacgggctggcacgac
ctcggcgtgaccgcgcagcgcgcggcctacgaagcgcatggcgacgacttcgaaaacgac
ccggaaaaagccatgtactgggatgcgaacgccgacgttgcggtcgtgccgccgggctac
aaggaagacaagaaaggctatttccgcatgcggcccggcgaggcgcaggtgagcgtggtg
gcgaacacgcccgagcgcgccgaagtcagcgtgcgttcgcgcccgacggccgtgtttccg
ttcgatatcgacgtgcgttacacgctgttgcgcggccatagcggcttctacgcgcaggcc
gaggtgcatcacggcgcggatcaaccggcggcgaccttctatcaaaaccgcttcgtcgtg
aagacggtgatggacggcactttcgatcactgggccgtgggcgacagcaaattcgtgccg
attccgcaaggcgcgatcagccgcgaactgagcgacgcgaccttccagctcgacgacggc
acgatcaagaccaagtacatgaactcggtgttctggtcgcaggtgccggtgtacggttac
gtgggcgcgcagcgcggcctctggatgatcgaggcgagccccgagtaccacaacggcggc
ccggtcaagcagggccagacactgcacgacaacgtgctgctgcgggtgctgcagtcggtg
cacttcggcgcgtcggcggtcgtgctcaaggacggcgaggactggcgcaaggtctacggt
ccgttcctcgtctatgccaatcgcgccgacggtccggccgcactctgggccgacgccgaa
cgccaacacgcgcgcgaagtcgccgcgtggccgtacacgtgggtcgatacgccggcgtat
cggcagacgcgcggcgaagtgagtggtagcgtgagtctggcgaatgacgcatcgaagctc
gcatccaggcccgcatcaaagcccgtgacgcacgcgtgggcgatcctgtccgaccccggc
gtgccctggagcgcgcagaacaaaggctacgcgttctggagcgcactcgacgacgcgggt
catttcgatctgcacaacgtgattcccggcgtctacgacctgcatgtgagcggcgcggat
caacccgaagacctcgtcgtgcacaacgtgcgcgtgggcgcggaccagcatctcgatctc
ggtgcgataacgtggcccgtggaggagccgggcgtgcgcctctggcagatcggccgcttc
gatcgctcggccgcggagttccgcaatggcgacgacgcgcgcaactatcagatgttccgc
cgctatccgaagcagtttccgcacgatgtcgatttcgtgatcggcaagagcgatcccgcg
cgcgactggaattacgcgcagtggaccgtctacgcggaacgtccggactggcgcattcat
ttcgatctcagccgcgcgcaatcgggcaaggccacgttgacgatcggctttgcatccgcg
cagcccgagcagggcaagacgctgaccgatctgcgcgtggccgtgaacggcaccgaggtc
gcgcagatccgtctgcccaagacgggcacggcgggttatcgcggcagcgcgcaggattcg
ccgtacaacgtgcgcgcgatcgtgttcgacgcggcgttgctgaaggcgggcgagaacacg
gtgagcctctatcacgccgatggcgtgccctacgcgcgcttcacgctcgcgggcagcgat
cagcgcgtgccggcgaacaccacgccgggccaggtgatgtacgacgcgctgcggctcgac
gtggacacgtatgcggacaagaacgcggacaaaaacgccgccgcatccaacccctaa
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