Paraburkholderia tropica: G5S35_27425
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Entry
G5S35_27425 CDS
T07044
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptro02000
]
G5S35_27425
Transporters [BR:
ptro02000
]
Other transporters
Pores ion channels [TC:
1
]
G5S35_27425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QNB15338
LinkDB
All DBs
Position
C:888313..890259
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AA seq
648 aa
AA seq
DB search
MKYRQFASTVLASAVAACAWQGAYAQTSPQSAEESAEPTQADATLPNILVVGDTQHLPQS
FDQRYASTQVLTRADLDRLDPIDPSITQALATLPGVSVSQSGGPGATASVSIRGSAANQV
AVFIDGIRVGSATTGTAAWADLPTSAFDRVEVISGPAAASFGADAVGGVVQLFTRHASNQ
PNQTTVSFGGGSNKTFDTQLRTSGTVPSSGPLAALGGLTYSLGLHDYNTAGIDATKPWAY
GHEDGRNPYHAQDVDARLGYARENWSISTFALYHRSDLSYDNAGYADRQRDHQLTTGVAF
HLDITPTTQFDQSFGYAYDRQFLYANDPGMPTDEIDSTRLSTSTSITHQETGHTLFGHAL
SGETKLAYDFTREQAYLPVDVPDGLPARNDSAVSLHQSATLGDWTLFLAGRHEIVQGQSV
NTGNAALAWAITPVYTARVSYGNAFRLPTFNDLYYPGYANPNLQPERSDTVEVALDAATS
IGTFTAALYDTRVHDLITYDSQTFLPVNVGRAHIQGIDLSYKGTLGANTLVSVAAGLLNP
QDVSDQTWLNRRPRQTVNLSVDHTWDAFHLHALSTGISLLYGGSTFDDQYNTTYLPSYTT
VNLRATYKINAHLALSATLSNLFNRDYSTAYGYNSLGRTAFGKITYTF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatcgtcaattcgcttccaccgttctcgcgtccgccgtcgcggcctgcgcctgg
cagggcgcttatgcgcaaacgtcaccgcaaagtgctgaagaaagcgctgaaccaacccag
gccgacgccacgttgccgaacattctcgtggttggcgacacgcagcatctgccgcaatcg
ttcgatcagcgttacgccagcacgcaggtgctcacgcgcgccgatctcgaccggctcgac
ccgatcgacccgagcatcacgcaggcgctcgccacgctgccgggcgtcagcgtttcgcag
agcggcggtcccggcgcgacggcgtcggtcagcattcgcggctcggcggccaatcaggtg
gccgtgttcatcgacggcatccgcgtgggctcggcgaccacgggcacggccgcgtgggcc
gatctgccgacctcggcgttcgatcgcgtggaagtgatttccggcccggcggcggcgtcg
ttcggcgcggatgcggtgggcggcgtcgtgcagctcttcacgcgccacgcctcgaatcag
ccgaaccagaccacggtgtcattcggcggcggctcgaacaagaccttcgacacgcagctg
cgcacctcgggcaccgtgccgtcgagcgggccgctcgcggcgctcggcggactcacgtat
tcgctcggtctgcacgactacaacaccgcgggcatcgacgcgaccaagccgtgggcctac
ggtcacgaggacggccgcaatccgtatcacgcgcaggacgtggacgcgcgtcttggctac
gcgcgcgagaactggtcgatctcgaccttcgcgctctatcaccgctcggatctctcgtac
gacaacgcgggctacgcggatcgccagcgcgatcatcagctcacgaccggcgtggcgttt
catctcgacatcacgccgaccacgcagttcgaccagtcgttcggctatgcgtacgaccgc
cagttcctctacgcgaacgaccccggcatgccgaccgacgaaatcgattcgacgcgcctg
agcacgtcgacgtcgatcacgcatcaggaaaccggtcacacgctgttcggtcacgcgctc
tcgggcgagaccaagctcgcgtacgacttcacgcgcgagcaggcgtatcttcccgtcgat
gtgccggacggcctgcccgcgcgcaacgattccgccgtctcgctgcatcagtcggcgacg
ctcggcgactggacgctgttcctcgccgggcgccacgagatcgtacaggggcaaagcgtg
aacacgggcaacgcggcgctcgcgtgggcgatcacgccggtctataccgcgcgcgtgtcg
tacggcaacgcgttccgtctgccgaccttcaacgacctctactatccgggctacgcgaat
ccgaatctgcaacccgagcgcagcgacacggtggaagtggcgctcgacgcggcgacgtcg
atcggcaccttcacggcggcgctctacgacacgcgcgtgcacgacctcatcacctacgat
tcgcagaccttcctgcccgtcaacgtgggccgagcgcatattcagggcatcgatctctcg
tacaagggcacgcttggggcgaacacgctggtcagcgtcgcggcggggctgctcaatccg
caggacgtgagcgatcagacctggttgaaccggcgtccgcgtcagactgtgaatctgagc
gtcgatcacacgtgggacgcgtttcatctgcacgcgctgagcacgggcatttcgctgctc
tacggtggctcgaccttcgacgaccagtacaacacgacgtatctgccctcgtacacgacg
gtcaatctgcgcgccacgtacaagatcaatgcgcatctcgcgctgtcggccacgctctcg
aacctgttcaatcgcgactactcgaccgcatacggctacaactcgctgggccgcacggcg
ttcggcaagatcacgtacacgttctga
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