Paraburkholderia tropica: G5S35_31500
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Entry
G5S35_31500 CDS
T07044
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptro03032
]
G5S35_31500
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_31500
Enzymes [BR:
ptro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G5S35_31500
DNA replication proteins [BR:
ptro03032
]
Prokaryotic type
DNA Topoisomerases
G5S35_31500
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5S35_31500
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNB17136
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Position
D:complement(214224..215426)
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AA seq
400 aa
AA seq
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MPVRFADAVDVDGNAHAARRHVNCWRVVEHEQHAREARVTRHQVLTDVPERLAVVRKAVA
DELPCGLRYVDDSRRGYTRKRSRSGFVYFDTRGKRIDGEREIRRIRALAIPPAYTDVWIC
PDARGHLQATGRDARGRKQYRYHPEWRATRDADKYERLLAFGAALPKLRACVERDLALDG
MPRNKVLATVVRLLDTTLIRIGSEEYARDNRSYGLTTLRKRHLTVSPKGLRFRFRGKSGI
EHDVAVSDPRVARIMKRCMDLPGQELFQYLDADGTRHVVDSADVNDYLREATGAEFTAKD
YRTWAGSVFALAALRKLEWATVTEARSQLVSTIKAVSQLLRNTPAVCRKCYVHPAIIAAF
EAGELAAAMGISRRRGLKSDEAALVMFLGKYAKPVVKRAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgagattcgccgatgcggttgacgtcgacggcaacgcccacgccgcgcggcgg
cacgtgaattgctggcgcgttgtcgaacacgaacaacacgcgcgggaggcgagggtgacc
agacatcaagtattgaccgacgtccccgaacgactcgctgtcgttcgcaaggccgtggcg
gacgagcttccctgcgggctgcgttatgtcgacgactcgcgccggggctacacgcgcaag
cgcagtcgcagcggtttcgtgtacttcgatacacgcggcaagcgcatcgacggcgagcgc
gaaatccgccgcattcgtgcgctggccattccgcccgcctataccgatgtctggatctgc
ccggatgcgcgcggccatcttcaggcgaccggtcgcgacgcacgcgggcgcaagcagtat
cgctatcatcccgagtggcgcgcgacccgcgatgccgataaatacgagcgtttgctcgcg
tttggcgcggcgctgccgaagctgcgcgcctgcgtcgaacgcgatctcgcgctcgacggc
atgccgcgcaacaaggtgctggcgaccgtggtgcgtctgctcgatacgacgctgatccgg
atcggcagcgaagagtacgcgcgagacaatcgctcatacggattgacgacgctgcgcaag
cggcatctgaccgtgtcgccgaaggggctgcgcttccggtttcgcggcaagagcggcatc
gaacacgacgtcgccgtgagcgacccgcgcgtggcgcgcatcatgaagcgctgtatggat
ttgccgggccaggagctgtttcagtatctcgatgcggacggcacacggcacgtcgtcgac
tcggcggacgtcaacgattatctgcgcgaggcgaccggcgcggaattcacagcaaaggac
tatcgaacgtgggcaggcagcgtgttcgcgctcgcggctttaaggaagctggagtgggcg
acggtgaccgaggcgcgttcgcaactggtcagcaccatcaaggcggtctcgcaactgttg
cgcaatacgccggctgtgtgccgcaagtgttacgtgcatccggccatcatcgcggcattc
gaagccggtgaactggctgcggcgatgggcatttcacgccggcgcggcttgaagagcgat
gaggccgcgctcgtgatgtttcttggcaagtatgcgaagccagtcgtgaaacgtgccgca
tga
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