Paraburkholderia tropica: G5S35_32905
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Entry
G5S35_32905 CDS
T07044
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_32905 (sbcD)
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S35_32905 (sbcD)
Archaeal homologous recombinant proteins
G5S35_32905 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QNB16427
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All DBs
Position
D:550013..551257
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AA seq
414 aa
AA seq
DB search
MRLLHTSDWHLGQNFMGKSRQAEHQQLIDWLVTQLDAHAVDAVLIAGDIFDTGTPPSYAR
ELYSQLVVRLHAAGVTLLLLGGNHDSVATLRESSALLERLSAQVVPHADAAPNQVRVLPL
RGKPDEAGCVVCAIPFIRARDVMQGETGQSAEQKQQSLQQAIQAYYQAVFAAAEARRAQL
SAELGRPVPLIATGHLTTVGASASESVREIYVGALDAFPTSAFPPADYIALGHIHRPQKV
GGLEHIRYSGSPIALSFDEATQRKEILLVDVGANGLDAVTPLAVPAFQTLAALRGNLKTL
PAAFAEIARDATPERPAWLEVTVAEDDYLADLPARIQAMTEDLPLDVLRIRRERGNAAAQ
LSADSGVTLDELDPLDVFARRLAHETLDDDVRGALTDRYKNVLAAMQATPEDDA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctccacacctcagactggcatctgggccagaacttcatgggcaagagccgc
caggccgagcatcagcagctcatcgactggcttgttacccagctcgacgcccatgcggtc
gacgccgtcctgatcgccggcgatattttcgataccggcacgccgccgagctacgcgcgc
gagctgtacagccagctcgtcgtgcgcctgcacgccgcgggcgtgacgctgctcctgctc
ggcggcaatcacgattccgtggcgacgctgcgcgaaagcagcgcgctgctcgaacgcctg
tcggcccaggtcgtgccgcacgcggacgccgcgcccaaccaggttcgcgtgctgccgctg
cgcggcaagcccgacgaagcgggctgcgtggtctgcgcgattccgttcatccgcgcgcgc
gacgtgatgcagggcgaaaccggccagagcgccgaacagaagcagcagtcgctgcaacag
gcgattcaggcctactaccaggccgtgttcgccgccgccgaggcgcgccgcgcgcaactg
tccgccgaactcggccgcccggtcccgctgatcgccaccggccatctgaccaccgtgggc
gcgagtgcgagcgaatcggtacgcgagatctacgtgggcgcgctcgacgcgttccccacc
agcgcatttccgccggccgactacatcgcgctcgggcatattcatcgtccgcagaaagtg
ggcggcctggagcacatccgctatagcggctcgccgatcgcgctgagcttcgacgaagcc
acgcagcgcaaggaaatactgctcgtcgatgtcggcgcgaacgggctggacgccgtcacg
ccgctcgccgtgcccgcgttccagacgctcgccgcgctgcgcggcaatctgaagacgctg
cccgccgcctttgccgagatcgcgcgcgacgccacgcccgagcgccccgcgtggctcgaa
gtaaccgtcgccgaggacgactatctcgccgacctgcccgcgcgcatccaggcgatgacc
gaggatctgccgctcgacgtgctgcgcattcgccgcgagcgcggcaacgccgccgcgcaa
ctttccgccgactcgggcgtgacgctcgacgaactcgatccgctcgacgtgttcgcgcgc
cgcctcgcgcacgaaacgctcgacgacgacgtgcgcggcgcactcaccgaccgctacaag
aacgtactcgccgccatgcaggccacgccggaggacgacgcatga
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