Paraburkholderia tropica: G5S35_33365
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Entry
G5S35_33365 CDS
T07044
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptro
Paraburkholderia tropica
Pathway
ptro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S35_33365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptro03021
]
G5S35_33365
Transcription machinery [BR:
ptro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5S35_33365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_11
HAC6_helical
HTH_24
GerE
HTH_20
HTH_28
HTH_Tnp_ISL3
TnsD
HTH_40
DUF8073_M
HTH_3
Terminase_5
MazG-like
Motif
Other DBs
NCBI-ProteinID:
QNB16504
LinkDB
All DBs
Position
D:664594..665109
Genome browser
AA seq
171 aa
AA seq
DB search
MSAVQLDVQREVHALYRDHHGWLHGWLRRKLGNAFEAADLAQDTFLRILGAHERLGALEL
REPRAYLTTVARRVLLNHYRRLSLEQAFLDALACLPEPQAPSPEDRYLILETLHEVDAML
DGLAPRARTAFLLAQLEGLTYAEIAEKLDVNVRTVKRYMASAFEACLLMTL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtccaactcgacgtgcagcgggaagtgcatgcgctctaccgtgaccatcac
ggctggctgcatggctggctgcgccgcaagctcggcaacgccttcgaagcggcggacctc
gcacaggacacgttcttgcgcattctcggcgcgcacgagcggcttggcgcgctcgaactg
cgcgagccgcgcgcctacctcaccacggtcgcgcgccgcgtgctgctcaatcactaccgg
cggctgtcgctcgaacaggcctttctcgacgccctcgcctgcctgccggagccgcaggcg
ccctcgcccgaagaccgctatctgatcctcgaaacgctgcacgaagtcgatgcgatgctc
gacggcctcgcgccgcgcgcgcgcacggcgtttctgctcgcgcagctcgaagggctgacc
tacgcggaaatcgccgagaagctcgacgtcaacgtgcgcacggtgaagcgctatatggcg
agcgcgttcgaagcctgcttgctgatgacgctgtga
DBGET
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