Polynucleobacter tropicus: DCO17_00430
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Entry
DCO17_00430 CDS
T08318
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCO17_00430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrp03021
]
DCO17_00430
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_00430
Enzymes [BR:
ptrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCO17_00430
Transcription machinery [BR:
ptrp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCO17_00430
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCO17_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF6165
Motif
Other DBs
NCBI-ProteinID:
QKM63825
UniProt:
A0A6M9PYI2
LinkDB
All DBs
Position
70561..71541
Genome browser
AA seq
326 aa
AA seq
DB search
MQTNLLKPKIISVEALTANQAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAG
VVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEI
INPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDETSKIIGRIVLDASFSPVSRVS
YAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAASILVDQLVVFAALESSEVSGDLA
PSRSSMVDPMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKDVLAARGLSLGMKLESWPPANLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatttgctcaagccaaaaattatttctgttgaagcgcttaccgccaaccag
gctaaggttgttatggagccgtttgagcgtggctatggccacacactcggcaatgcacta
cgtcgcgtactcttgtcctcgatggttggttatgctccaactgaagtagctattgcaggt
gtagtacatgaatattccactttggatggcgtgcaagaagacgttgtaaacctcttgctc
aacctcaaaggcatcgtatttaagttgcaatcacgtgacgaagtcacaatcaatttgcgt
aaagaaggtcctggcgtcgttactgctaaagatattgatttgccacatgatgtagaaatt
attaatcctgatcacgtgatcgctcacttgtctgctggtggcaagttagatatgcagatc
aaggttgaaaaaggtcgcggctatgttcctggtaatgttcgtcagtacaacgacgaaact
tctaagattattggccgcatcgttttagatgcatcatttagcccagttagccgtgttagc
tacgctgttgaatctgctcgtgttgagcaacgtaccgacctcgatcgactcgtaatgact
attgaaaccaatggtgtgctgtctcctgaagaagcaattcgtcaagctgctagcatcttg
gttgatcaattggttgtattcgcagctcttgagagtagcgaagtttctggcgatctcgca
ccaagccgctcttcaatggttgatccaatgttgatgcgtccagtggatgatcttgagctc
acagttcgctctgcaaactgcttgaaggctgagaacatttactacatcggtgatttgatc
caacgtacagagaatgaattgttgaagacgcctaatttgggccgtaagtccttgaatgaa
atcaaagacgtattggctgctcgtggcttaagtctcggcatgaaactcgaaagttggcct
ccagctaacctcgagaaataa
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