Polynucleobacter tropicus: DCO17_00720
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Entry
DCO17_00720 CDS
T08318
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCO17_00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_00720
Enzymes [BR:
ptrp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DCO17_00720
DNA repair and recombination proteins [BR:
ptrp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DCO17_00720
Prokaryotic type
DCO17_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Endosulfine
Motif
Other DBs
NCBI-ProteinID:
QKM63879
UniProt:
A0A6M9PT96
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All DBs
Position
complement(124366..125139)
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AA seq
257 aa
AA seq
DB search
MYSFSKEAIPQDWRELLGDYFDSPDWKLLENNIQNELNTNLGMVRPEPQNFFKALALTPV
DSVKVVILGQDPYHSPGLAQGLAFSIPNNISPNSREFPSSLRNISKALSIEGFGALSNGD
LHHWAEQGVLLLNTALSVKLGEAGSHTNLGWKSLIDRLISALSTQKPQLVWLLWGGHAQS
KLPLIVQNNDQLVLQSSHPSGLGVYKTNLPFLAPADKDSCRHFTKTNDWLITHHLEPIQW
VKTTTTKDEKAQGNLFS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtactccttttccaaggaagccattccacaagactggcgcgagttattgggcgactat
ttcgacagtcccgactggaaactactcgagaacaatattcaaaacgaattgaataccaat
cttggaatggttcggcccgagccacaaaattttttcaaagcactcgcattaacccccgtt
gactctgtaaaggtagtcatcctaggtcaggatccttatcactctcctggtctcgcacaa
ggcttggcattttctattccaaataatatctcgcctaactcacgagagtttcccagctcg
ctacgcaacattagtaaagcactcagcatcgagggttttggtgcattatcgaatggcgac
ttgcatcactgggctgagcagggagttttattactcaatactgcgctcagcgtcaaattg
ggcgaggctggaagtcatacgaatttaggctggaagagtttgattgacagattgatttct
gcactatcaacccaaaagccgcagttggtttggctactttggggtgggcatgctcaaagc
aaattacctttgattgttcaaaataacgatcaactcgttttgcaatcttcacacccctcc
ggtctaggtgtatacaaaacaaacttgccctttttagcgcctgctgacaaagatagttgt
cgacactttacaaaaaccaatgactggttaattactcaccacctagaaccaatccaatgg
gtgaaaactacaacaaccaaagatgaaaaggctcaaggcaatttatttagttaa
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