Polynucleobacter tropicus: DCO17_01035
Help
Entry
DCO17_01035 CDS
T08318
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCO17_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrp03019
]
DCO17_01035
Messenger RNA biogenesis [BR:
ptrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DCO17_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QKM63935
UniProt:
A0A6M9PYV7
LinkDB
All DBs
Position
complement(188543..189142)
Genome browser
AA seq
199 aa
AA seq
DB search
MLDREGYRPNVGIVLLNSRNEVFWGKRVGQHSWQFPQGGIAHGESPEQAMYRELHEEVGL
LPEHVQIIGRTRDWLRYDVPEEYLRRQHATRVHRAAYRGQKQIWFLLRFVGLDSDIQLRA
TEHPEFDAWRWVPFWIQLDAVIGFKREVYQLALSELARYLAKGVRMQQLAWGTPLDFFQS
FYSKGDDSSKESTKTDKQK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaagggtatagacccaatgtcggcattgtcctccttaacagccgtaac
gaggttttctggggaaaacgcgttgggcagcattcgtggcagttcccacagggtgggata
gctcatggtgaaagccctgagcaggcgatgtaccgcgaattgcatgaagaggttggcttg
ctaccggaacatgtccaaatcattggacgaacaagggactggctccgctatgatgtccct
gaggaatacttacgccgccaacatgctactcgcgttcaccgtgcagcctatcgaggtcaa
aaacaaatctggtttctgttgcgctttgttggtttagatagtgacattcagttacgtgct
accgaacatcctgaattcgatgcttggcggtgggtgccattttggattcaacttgatgct
gtgattggctttaagcgtgaagtctatcagctcgctttatctgagctagcacgctacctc
gctaagggtgtgcgtatgcaacaacttgcctggggaacaccgctagatttctttcagtct
ttctactccaaaggagacgacagctcaaaagaatccaccaaaacagataagcaaaaataa
DBGET
integrated database retrieval system