Polynucleobacter tropicus: DCO17_01245
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Entry
DCO17_01245 CDS
T08318
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptrp
Polynucleobacter tropicus
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_01245
Enzymes [BR:
ptrp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DCO17_01245
DNA repair and recombination proteins [BR:
ptrp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DCO17_01245
Prokaryotic type
DCO17_01245
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKM63974
UniProt:
A0A6M9PNP7
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All DBs
Position
complement(235435..236907)
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AA seq
490 aa
AA seq
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MEKALVWLRRDLRLYDNAALSHALRESKQVWLAFVFDTDILQPLLKGELDSKGLKHDRRV
DFIWQGLKQIDDQLRQSGGGLIVRFGKPTECIPQIAKELGVQTVFTNHDYEPSANDRDET
VKTLLSKLGIEFETFKDQVIFEKKEILTNSNTVFSVFTPYKNNWLKTLQEKDLAAHDCNP
KQGQYAPIPKKLDLPFLSLESMGFCPTGIESYLPPGSEGGQLFLDDFLSRIDQYQVGRDF
PAIKGVSYLSTHLRFGMLSIRGLVREAHRRMLTGSMGATIWLSELIWRDFYFMILANHPR
LATGVSFKPDYDNIIWESGAHAKKLFQAWCEGKTGYPLVDAAMHQLNQTGYMHNRLRMVV
ASFLTKDLGIDWRWGEAYFAEHLNDFELSSNNGGWQWASSSGCDAQPYFRIFNPITQSEK
FDSEGKFIRRYLPQLEKLSKKTIHAPWQAGHIELEAAGIVLGRDYPHPIVDHDEARKKTL
VRYSVVKKVT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcacttgtttggcttcgtcgagaccttcgcctgtatgacaatgcagccctt
tctcatgccctaagagaaagtaagcaggtctggttagcttttgttttcgataccgatatt
cttcaaccccttctgaagggtgaactggattccaagggccttaaacatgatcggcgcgta
gatttcatctggcaaggcttaaagcaaatagatgaccagcttcgccaatccggagggggg
ctcatcgtgcgctttggaaagcctactgaatgcattccccaaattgccaaagagctaggt
gtacaaactgttttcacaaatcatgattacgagccctctgcgaatgatcgagatgaaact
gtaaaaacattattgtcaaaattaggtattgaatttgagactttcaaagatcaagtaatt
tttgagaagaaagaaattctcacaaattccaatactgtcttttcagtctttacgccttac
aaaaataattggctgaaaacacttcaagaaaaagatctagctgctcacgattgcaatcca
aagcaagggcaatatgcacccattccaaaaaaactggatctgccattcctctcccttgag
tccatgggattctgccctaccggtattgaatcctatctcccgcctggctcggaaggtggt
cagctatttttagacgactttctctcgcgtattgatcagtaccaagttggtagagatttt
cctgcgattaagggtgtcagttatttatcaacacacttgcgctttggaatgctctcaatt
cgaggcctggtacgtgaagcgcatcgcagaatgctaactggcagcatgggagccaccata
tggcttagtgagctgatttggcgtgatttttatttcatgattctggcaaatcatcctcgc
ttagcaactggggtttcatttaaaccagactatgacaatatcatttgggaaagtggcgct
cacgccaagaaattatttcaggcttggtgtgaaggtaaaacaggctatccattagttgat
gcagcaatgcatcaactaaaccaaactggttatatgcacaatcgcttacgtatggttgta
gctagctttttgacaaaagatttgggaattgattggcgctggggagaggcttatttcgca
gaacatctgaatgattttgagctctcctcaaacaacggtggctggcaatgggcttcctct
tccggctgcgatgcccaaccctatttccgcatctttaaccccatcacccaatcagagaaa
tttgactctgaaggcaagttcatccgacggtacctgccgcagctcgagaaactctctaaa
aaaactatccatgccccctggcaagctggccatattgagcttgaagccgcaggcatcgtg
ttaggtagagactacccacaccctatcgtagatcatgacgaggcacgaaaaaaaaccttg
gtgcgctatagcgtagtcaaaaaagttacctag
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