Polynucleobacter tropicus: DCO17_01320
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Entry
DCO17_01320 CDS
T08318
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00521
Streptomycin biosynthesis
ptrp00523
Polyketide sugar unit biosynthesis
ptrp00541
Biosynthesis of various nucleotide sugars
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01250
Biosynthesis of nucleotide sugars
Module
ptrp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DCO17_01320 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DCO17_01320 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DCO17_01320 (rfbC)
Enzymes [BR:
ptrp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DCO17_01320 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QKM65627
UniProt:
A0A6M9Q2W8
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All DBs
Position
249176..249727
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AA seq
183 aa
AA seq
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MSVMPTAINDVLIVEPKVFGDDRGWFTESFNAQDFLAATGLNTNFVQDNHSFSGKGILRG
LHYQLEKTQGKLVRVVSGAVFDVAVDLRKSSLTYGKWVGVELSAENHRQLWVPAGFAHGF
LVVSEVAEFLYKTTDYYHPQSEVCLAWNDPSLSIKWPLEPGASPNLNAKDLAGLSWDQAP
KFE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atttctgtgatgccaacggcaatcaatgacgtcttgatagttgagcctaaagtttttggt
gatgatcgcggttggtttacagagtcattcaatgcgcaagattttttggcggctacggga
ctcaataccaattttgttcaagataatcattccttttctggcaaaggaattttgcgcggt
ctgcactatcagctggaaaaaacacaaggtaagttggtgcgtgttgtatctggtgcggta
tttgatgttgcggtcgatttacgcaagagttcgttaacgtacggaaaatgggttggcgta
gagctaagcgctgaaaaccataggcagctgtgggttcctgcgggatttgcacatggattt
ttagtggtctcagaagtggctgagtttttatataagactactgattactatcacccacaa
agcgaggtttgcttggcttggaacgatccctcgctctctatcaagtggccattagagcct
ggagcaagccccaatctgaatgctaaagatttggcgggcttatcttgggatcaggctcca
aagttcgagtga
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