Polynucleobacter tropicus: DCO17_01440
Help
Entry
DCO17_01440 CDS
T08318
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00260
Glycine, serine and threonine metabolism
ptrp00460
Cyanoamino acid metabolism
ptrp00630
Glyoxylate and dicarboxylate metabolism
ptrp00670
One carbon pool by folate
ptrp00680
Methane metabolism
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01200
Carbon metabolism
ptrp01230
Biosynthesis of amino acids
ptrp01240
Biosynthesis of cofactors
ptrp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DCO17_01440 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DCO17_01440 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DCO17_01440 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DCO17_01440 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DCO17_01440 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DCO17_01440 (glyA)
Enzymes [BR:
ptrp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DCO17_01440 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QKM64007
UniProt:
A0A6M9PYF4
LinkDB
All DBs
Position
268423..269667
Genome browser
AA seq
414 aa
AA seq
DB search
MFDRQNTLAKVDPQLWEAIQNENKRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRVKALFGAEAANVQPHCGASANQAVFLAFLKPGDTFMGMS
LAEGGHLTHGMALNMSGKWFNPIAYGLDKNEEIDYEQMERLAREHKPKLIIAGASAYSKK
IDFERIGKLAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAVFPGLQGGPLMHVIAAKAVAFKEAADPGFKDYQKQVVANAKALAETLI
ARGLRIVSGGTDSHVMLVDLRAKKMTGKEAERVLGEAHITCNKNGIPNDPEKPMVTSGIR
LGSPAMTTRGFKEAEARQVGNFIADVLDNPNDPENIAMVRAQVAELTKRFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgccaaaacaccttagccaaagttgatcctcagctctgggaggccatccag
aacgaaaacaagcgtcaggaagaccatattgagctgatcgcctctgagaactacacttcg
ccagcggtaatggcggctcagggttcccagttgaccaataagtatgctgaaggttatcca
ggtaagcgttattacggtggttgcgaatttgttgatgtggcagagcaattagcaattgat
cgtgttaaagcattgtttggtgcagaagcagcaaacgtgcaaccgcattgcggcgcctct
gcgaaccaagccgttttcttggcattcttaaagcctggtgacacatttatgggtatgagt
ttggctgaaggtggtcacttgactcacggtatggctctcaacatgagcggtaagtggttt
aacccaatcgcttacggtttagataaaaatgaagaaatcgattacgagcaaatggaaagg
ctggctcgagagcacaagcctaaattaatcattgctggcgcttctgcctactccaagaaa
attgattttgagcgtattggaaagttagctaaagaagtgggcgcgattttcatggtggac
atggcgcactatgctggcctcgttgctgcaggtgtttatccaaacccggtgccgcatgct
gatattgtgacctctacaacccacaagagcttgcgtgggccccgtggcggcatcatcttg
atgaaggcagagcacgagaaagcgattaattcagcggtatttcctggattgcaaggtggc
ccattgatgcatgtgatcgcagctaaagcagttgcgttcaaagaggctgcagacccaggg
tttaaggattatcaaaaacaggttgtggcaaacgccaaggctttagctgagacattaatt
gctcgtggcttacgcattgtttctggaggcactgattcgcatgtaatgttggtcgatctg
cgcgccaagaaaatgactggtaaagaagctgagcgtgttttaggtgaggcgcatatcact
tgtaataaaaacggcatccccaatgatccagaaaaaccaatggtgactagtggtatccgt
ttaggttcaccagcaatgacaacgcgcggctttaaagaagctgaagcaagacaagtgggt
aactttattgctgatgttttggataatccaaacgatccagaaaatattgctatggtacgc
gctcaagttgctgagttaactaagcgtttcccagtctacggttaa
DBGET
integrated database retrieval system