Polynucleobacter tropicus: DCO17_01900
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Entry
DCO17_01900 CDS
T08318
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00020
Citrate cycle (TCA cycle)
ptrp00480
Glutathione metabolism
ptrp00720
Other carbon fixation pathways
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01200
Carbon metabolism
ptrp01210
2-Oxocarboxylic acid metabolism
ptrp01230
Biosynthesis of amino acids
ptrp04146
Peroxisome
Module
ptrp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptrp_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCO17_01900
09102 Energy metabolism
00720 Other carbon fixation pathways
DCO17_01900
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DCO17_01900
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DCO17_01900
Enzymes [BR:
ptrp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
DCO17_01900
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
QKM64090
UniProt:
A0A6M9PMS7
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Position
363767..366001
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AA seq
744 aa
AA seq
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MASEKSKIIYTLTDEAPLLATCAFLPVIRTFTAPAGVEIVKSDISVAARILAEFSDCLTD
AQKVPDNLGELGKMTLLPDTNIIKLPNISASVPQLLAAIKELQNKGYKIPNFPDDPKTEE
EKAIRARYSKCLGSSVNPVLREGNSDRRAPPAVKRYARKNPHSMGEWSQASRTHVSHMHG
GDFYSSEKSMTMTKACDVKMDLVTKSGKTIVLKPKVSLLAGEIIDSMYMSKKALCEFYEK
EIEDAYKTGMMLSLHVKATMMKVSHPIVFGHAVKIFYKDAFEKHAKLFEELGVNANNGMS
SLYDKIKTLPESKREEIIQDLHACHEHRPALAMVDSAKGITNLHSPSDVIVDASMPAMIR
VGGKMWGADGRLHDTKAVIPESTFARIYQEMINFCKTHGNFDPRTMGTVPNVGLMAQQAE
EYGSHDKTFEIPEAGVARIVADDGTVLLEQNVEEGDIWRMCQVKDAPIRDWVKLAVNRAR
LSNTPAVFWLDEYRPHEAELIKKVKTYLKDYDLEGVDIQIMSQTRAMRYTLERVIRGKDT
ISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQLVEENH
LRWDSLGEFLALAVSLEDIGDKTGNPKVKILARTLDEATGKLLDNNKSPSPRTGELDNRG
SQFYLAMYWAEALANQTEDKELAAHFAPLAKSLAENEQKIVAEFKAVQGKPADIGGYYVA
DSEKCKAVMRPSPTFNAALKAARA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagaaatcaaagattatttacacgctgacagacgaagcgccgcttttggcg
acttgcgcatttttgccagttattcgtactttcacagcgccagccggagtggagatcgta
aagagcgacatctcagttgctgcacgtattttggctgagttttctgactgcttaacggac
gcccaaaaagttccagacaatttaggtgagttgggcaagatgactttgctcccagacact
aacattattaagttgccaaatatcagtgcctctgtgccgcaattgctcgcagctattaaa
gagttgcaaaacaagggctacaagattcctaatttcccggatgatcctaagactgaagaa
gaaaaagcgattcgcgctcgttactctaagtgcttgggtagttctgtaaacccagtattg
cgtgaaggtaactctgaccgccgtgcgcctcccgctgtgaagcgttacgctcgtaagaac
cctcactctatgggtgagtggagccaggcttcccgtacacacgtttcacatatgcatggt
ggcgacttctactccagtgagaagtcaatgactatgactaaggcttgtgatgtgaagatg
gacttggttaccaagagcggaaaaaccattgtgcttaagccaaaagtctctttgctggct
ggtgaaatcatcgatagcatgtacatgagcaaaaaggccttgtgcgagttttacgaaaaa
gaaatcgaagacgcatacaagactggcatgatgttgtccttgcacgtgaaggcaactatg
atgaaagtgtcacacccgatcgtattcggtcatgcggtgaagattttctataaagatgct
tttgagaagcatgcgaagttgttcgaagagttgggcgttaacgctaacaacggtatgagc
agcttgtacgacaagatcaaaactttgccagagtctaagcgcgaagaaatcattcaagat
ttgcatgcttgccacgagcatcgtcctgcattggcgatggtggattcagcaaaaggtatt
accaacttgcattctccaagcgatgtgattgtggatgcgtcaatgccggcaatgattcgt
gtgggtggcaagatgtggggcgcggacggtcgtttgcacgacactaaagcggtaatccct
gaaagtacttttgctcgtatctatcaagaaatgatcaatttctgtaagacacatggcaat
tttgatccaagaaccatgggtaccgttccaaacgtgggcttgatggctcaacaggcagaa
gagtacggctcacatgacaaaacatttgagatccctgaagctggtgtggctcgtattgtt
gctgatgacggcactgtattgcttgaacaaaacgtagaagagggtgatatctggcgtatg
tgccaagtgaaagatgccccaatccgtgactgggtcaaattggcggttaaccgcgcgcgt
ctctctaataccccagcagtattctggttagatgagtaccgtccgcacgaggctgaattg
atcaagaaggtaaaaacatatctaaaggactacgaccttgaaggtgtagatatccagatc
atgtctcagactcgcgcaatgcgttacacccttgagcgtgtaattcgcggtaaggatact
atttctgtaactggcaatatcttgcgtgactacttgactgacttgttccctattatggaa
ttgggaaccagcgcgaagatgctctcgattgttccattgatggctggtggaggtttgttc
gaaaccggcgcaggcggttctgcaccgaagcacgtacaacagttggtagaagaaaaccac
ttgcgttgggattcacttggtgagttcttggctttggccgtatcccttgaggacattggc
gataagacgggcaatccaaaagtgaagatcctcgctcgtactctggacgaagctacaggt
aagttattggataacaataaatcgccttcaccgcgtactggtgagttggataaccgcgga
agtcagttctacttggcgatgtattgggcagaagcattggccaatcagaccgaagataag
gaattggcagcacatttcgcgcctttagcaaaatctttggcagaaaatgagcagaagatt
gttgcagagttcaaggcggttcaaggtaagccagctgacattggcggttactatgttgct
gattctgagaaatgcaaagctgtgatgcgtccaagcccaactttcaatgcagcattgaaa
gcggcaagagcgtaa
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