Polynucleobacter tropicus: DCO17_02125
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Entry
DCO17_02125 CDS
T08318
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DCO17_02125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrp03019
]
DCO17_02125
03009 Ribosome biogenesis [BR:
ptrp03009
]
DCO17_02125
03036 Chromosome and associated proteins [BR:
ptrp03036
]
DCO17_02125
Enzymes [BR:
ptrp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DCO17_02125
Messenger RNA biogenesis [BR:
ptrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCO17_02125
Ribosome biogenesis [BR:
ptrp03009
]
Eukaryotic type
90S particles
RNase
DCO17_02125
Prokaryotic type
rRNA processing factors
DCO17_02125
Chromosome and associated proteins [BR:
ptrp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DCO17_02125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QKM64130
UniProt:
A0A6M9PMX3
LinkDB
All DBs
Position
404942..405733
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AA seq
263 aa
AA seq
DB search
MNARAVIETAPLQERLGYSFKKPELLNQALTHRSHSKKNNERLEFLGDSVLNCVVAEMLY
ERYSDLDEGDLSRVRANLVKQQALYEIAQTLSLSDYLRLGEGELKSGGFRRPSILADTLE
AVTGAIFLDGGFDAAKTCLRKLYSIILSQVDPKTLGKDDKTLLQECLQSYQLPLPTYNVT
GTSGAAHNQQFEVECLIPSLKVAVKGGGASRRAAEQSAAKSALLAVLKALPQDSRKPKKT
RSAKKKAAKKEATEEQLYLKLKG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcgcgccgtcattgaaaccgcaccgcttcaagagcgcttaggctatagcttt
aagaagccagagcttcttaatcaagcgctgactcatcgtagtcatagcaagaaaaataat
gaacgcttagagttcttgggcgattcagtcttaaattgcgttgtcgctgaaatgctttat
gaacgctattctgatttggatgaaggggatttgtctcgagtgcgcgccaatttggtaaag
cagcaagccttatatgaaattgcgcaaaccttatctctgtcggattatttgcgtttaggt
gagggtgagttgaagagcggtggctttcgtaggccatcgattttggctgataccttagag
gcggtaacgggcgcgatctttttagatggtggctttgatgctgctaaaacttgcttacga
aaactctactccatcattctttcgcaggttgatccaaaaacattgggcaaggatgacaaa
acacttttgcaagagtgcttgcaaagctatcaattgccactacctacctataacgtcacc
ggcactagtggtgctgcccataatcaacagtttgaagtcgaatgcttaattccgagctta
aaagtagctgtaaaaggtgggggcgcctctcgtcgcgccgctgaacagtctgccgcaaaa
agcgctttacttgccgtgctgaaggccttgccacaagattctcgcaagccgaagaaaacg
cgctccgcaaagaaaaaagccgccaagaaagaggcgaccgaagagcaattgtatttgaag
ttaaagggctaa
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