Polynucleobacter tropicus: DCO17_02505
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Entry
DCO17_02505 CDS
T08318
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ptrp
Polynucleobacter tropicus
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrp03032
]
DCO17_02505
03036 Chromosome and associated proteins [BR:
ptrp03036
]
DCO17_02505
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_02505
DNA replication proteins [BR:
ptrp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DCO17_02505
Chromosome and associated proteins [BR:
ptrp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DCO17_02505
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DCO17_02505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QKM64198
UniProt:
A0A6M9PXX8
LinkDB
All DBs
Position
478685..479029
Genome browser
AA seq
114 aa
AA seq
DB search
MTDQEQQAITRSELVESLAEQFPQLLPRDVELAVKTLLDTMTQALAEGKRIELRGVGSFV
LHHRPARTGRNPKSGEKVLIPEKRVPHFKPGKELRERVDYKPLKQASPKEGTGA
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcaagagcaacaagcaatcacccgctccgaactagtggagagcttagcggaa
cagtttccgcagctactgcctagggatgtggagttggcggtaaagacattgctggacaca
atgactcaagccttggctgaaggtaagcgtattgagttgcgcggcgtgggaagttttgtg
cttcaccatcgtcctgcgcgcacaggtcgcaatccgaagtctggtgagaaagtattgatt
ccggaaaaacgcgttccgcacttcaagcctggcaaagagttgcgtgagcgagttgattac
aagcctttgaaacaggcgagccctaaagagggtactggtgcctag
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integrated database retrieval system
