KEGG   Polynucleobacter tropicus: DCO17_02885
Entry
DCO17_02885       CDS       T08318                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ptrp  Polynucleobacter tropicus
Pathway
ptrp02020  Two-component system
ptrp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ptrp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DCO17_02885 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DCO17_02885 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrp03021]
    DCO17_02885 (rpoN)
Transcription machinery [BR:ptrp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DCO17_02885 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_12 HTH_IclR
Other DBs
NCBI-ProteinID: QKM64269
UniProt: A0A6M9PUD3
LinkDB
Position
complement(541488..542873)
AA seq 461 aa
MAISLNTRVSQTVSLTPQLQQSIKLLQLSNSELEQELAKAAEENPLLEFEPNPEIESNHS
QSNERVEVAQQSWGGSQISQDDDEDWGERYERVAHKQTLLEYLDEQIHLLNINPEEQSLI
AYMAGCLDDRGYLPEDLKAIHTDIASQLAENTSFKHIEKALAKLQTLDPPGIGARDLAEC
LSLQIDRILENVKVDIAAWELAKEIVTSHLSKVGSKDWQKIKQASGKSEAEVLKAVELIR
TLQHNPGSQFERENDQWILPDVVVKIKQNRWIVESNPNAKPRLTLNNEYARILKENGQKK
IDGALKQKMLEASWLVKNIAQREETIQRVAQAIVERQQQFFSMGAIGMKPLVLREIAEEL
EMHESTISRVTTQKYLACPLGIFEFKYFFSSQVSTEKGGGISSTAIQALIKKIVEEESAK
KPISDTQIAQLLSEQGYIIARRTVAKYRDVLRIPPVHLRKQ
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccatctcacttaatacccgagtcagccagacggtaagccttaccccgcaattacag
caatctatcaagcttttgcaactctccaactcagagttggagcaagaattagccaaggcg
gctgaagaaaacccgctactagaatttgaacccaaccccgaaattgaatccaaccactct
caatccaatgagcgtgttgaggttgctcaacagtcttggggaggcagtcaaatctcccaa
gatgatgatgaagattggggggagcgctatgagcgtgtcgctcacaagcaaaccctattg
gaatatttggatgaacaaattcatcttctgaatatcaacccagaagagcaatccttaatt
gcctatatggccggatgtctcgatgatcgcggctaccttccagaagaccttaaggccata
cacacagatattgcatcccaactagccgaaaatacttcattcaagcacattgaaaaagcg
ctagctaagttacagacactcgatccacctggaattggcgctcgtgatcttgcagaatgc
ctttcccttcagattgatcgcattctagaaaacgtcaaagttgatattgccgcatgggag
ttagcaaaagaaattgttacatctcatttatcaaaggtgggctctaaggactggcagaaa
attaaacaggctagcggcaaatctgaagcagaagtactcaaagccgtcgaactcattcgg
acattgcaacacaatccaggctctcaatttgagcgcgagaatgatcaatggattttgccg
gatgtcgtcgtcaaaattaaacaaaatcgctggattgtggaatcaaaccccaatgcaaaa
cctcgcctcactttaaacaacgaatacgccaggatcctaaaagaaaatgggcaaaagaaa
attgatggcgccctaaagcaaaaaatgctggaagccagttggctagtaaaaaatattgct
caacgtgaagaaacaattcaaagggtggcacaagcaatagtagagagacagcagcaattt
ttctcgatgggcgcaatcggcatgaaacccttagttcttcgtgaaattgctgaagaattg
gaaatgcatgaatcgactatttcgagagttacaacccaaaaatacctagcatgcccttta
gggatctttgaattcaaatacttttttagcagtcaagtcagcacagaaaaaggcgggggg
atttcgtccaccgcaatacaggcgctaattaaaaaaattgttgaggaagaatctgcgaag
aaacccatttccgatacccagattgcgcaactattaagcgaacaaggttacattatcgcg
cgacgtactgtagcaaaatatcgagacgtccttcgcattccacccgtgcatctgcgcaaa
caatag

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