Polynucleobacter tropicus: DCO17_03020
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Entry
DCO17_03020 CDS
T08318
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp02020
Two-component system
ptrp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCO17_03020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DCO17_03020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptrp02022
]
DCO17_03020
02035 Bacterial motility proteins [BR:
ptrp02035
]
DCO17_03020
Two-component system [BR:
ptrp02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
DCO17_03020
Bacterial motility proteins [BR:
ptrp02035
]
Flagellar system
Flagellar assembly proteins
Others
DCO17_03020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
MCM
AAA
AAA_16
AAA_2
AAA_3
AAA_19
Myosin_head
nSTAND3
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QKM64295
UniProt:
A0A6M9PZZ2
LinkDB
All DBs
Position
complement(570906..572438)
Genome browser
AA seq
510 aa
AA seq
DB search
MSELANECFPVILVEDDEDLREAIAVTLRMKGIDFVTHQRAETVVPLLRPDLKTVLVTDY
KLPGMTGIDLLKIAQKECPDLPVVIMTAFADAKLAVEALKAGARDFLIKPFVPQQLIEII
SRYRAPDGASTNPINANNSSNSNNADAGSSTNETESKRSEIVGSEIRPADHNVIAVDPQT
VAIFSRCERVAATDTSVLVTGESGAGKEVVAHHIHKTSKRANGPYIAINCAAIPDTLLES
ILFGHEKGSFTGATKAQAGKFEQANKGTLFLDEIGEMPATLQTKLLRVLQDKKVERIGST
DSIQADVRIIAATNLNLQDQVKAGKFREDLYFRLNVFPIHVPELRKRPLDIIPLAEFFLK
RYSVNIGRDSLTLSNPAKALLQKYTWPGNVRELENIIQRAVLLADGDQISAQDLELDESQ
GNQSSAAKDQITSEIVENPNLSPKNGQNGTEIALNKSESQDIESVEREHILKVLAEVNGN
RTKAVEILGISARALRYKLKSYKDAGFLTE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcttgcaaatgaatgtttccccgtcatcctcgttgaggatgacgaagacctt
agagaggccattgcggtaacgcttcgcatgaagggcattgattttgtcacacaccagcgc
gccgaaacagtcgtgcctttgttgcgccccgatcttaagacggtcttagtgacagactac
aagctgccaggcatgactggcattgatctgctcaagattgcgcaaaaagaatgcccagac
ttacccgtggtgatcatgactgcattcgccgacgccaaacttgctgttgaagcacttaaa
gcaggtgcacgtgacttcttaattaaaccttttgtcccccagcaattgattgaaatcatt
tcgcgctatcgcgctcctgatggcgccagtacaaatccaatcaatgcaaataattccagc
aattccaataatgcagatgctggatcaagcactaacgaaacagaatccaagaggagtgaa
atcgttggatcagaaattcggcctgctgatcacaatgtgattgccgttgatccacaaacg
gtagcgatattttctcgttgtgagcgagttgccgcaactgatactagtgttttagtaacc
ggcgaatctggtgcgggcaaagaagttgtcgcgcatcatattcataaaacatccaagcgc
gcaaacggcccttatattgcgattaattgcgcagcaattccagacacacttctcgaatca
attttgtttggtcatgaaaaaggatcgtttactggagccactaaagcgcaagcaggtaag
tttgagcaagcaaataaaggcacactcttcttagatgaaattggtgagatgcccgcaaca
ttgcaaacgaaattgctgagggtgctacaggataaaaaggtggagcgcattggctcgacc
gattcgattcaagcagatgtgcgcatcattgcagccaccaacctcaacctacaagatcaa
gttaaagctggaaaattcagagaagatttgtactttcgtttgaacgtatttccaattcat
gtaccagaacttcgcaagcgtccactagacatcatccctttggctgaatttttcctcaaa
cgttacagcgtgaacatcgggagggattctttaaccctaagtaacccagccaaagcgtta
ctgcaaaaatatacctggcctgggaatgtacgggagctagaaaacattattcagcgagca
gtattgcttgctgatggagatcaaatctccgcccaagacctagagctagatgaatctcaa
gggaatcaaagtagcgcagctaaagatcagattacttcagagatagtagaaaacccaaat
ttgagcccaaaaaatgggcaaaatggcacagaaattgcattaaataagagcgaaagtcag
gatattgagtccgtagagcgtgagcacattctcaaagttttggctgaagtaaatggaaat
agaacaaaagccgtagagatattaggcatttcagcaagagccctgcgctacaagctcaaa
tcctataaagatgctggctttttaactgaataa
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