Polynucleobacter tropicus: DCO17_04920
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Entry
DCO17_04920 CDS
T08318
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00220
Arginine biosynthesis
ptrp00240
Pyrimidine metabolism
ptrp00250
Alanine, aspartate and glutamate metabolism
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DCO17_04920 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DCO17_04920 (carB)
00220 Arginine biosynthesis
DCO17_04920 (carB)
Enzymes [BR:
ptrp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DCO17_04920 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QKM64634
UniProt:
A0A6M9PQI0
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All DBs
Position
954773..958036
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AA seq
1087 aa
AA seq
DB search
MPKRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALRDEGYKVILVNSNPATIMTDPEM
ADVTYIEPITWEVVERIIATEKPDAILPTMGGQTALNCALDLHRNGVLKKYGCELIGASP
EAIDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAHEVQQRIQKETGSSGFPVVIRPSFT
MGGSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEFEMEVVRDRNDNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVDTGGSNVQFSINPVDG
RMIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLDEVS
TDLDDIINEINEPGPDRIWYLADAFRMGMGLDEVYSETKIDPWFLEQIEELITIEAELKQ
RKVDGLSAAELRFVKQRGFSDRRLAKLLSVDASSVRAIRHRLKVVPVYKRVDTCAAEFST
NTAYMYSTYEAEHGECESRPTDKQKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYET
IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPKGVIVQYGGQTPLKLALDLER
NGVPIIGTSPDMIDAAEDRERFQKLLHDLGLRQPPNRTARTEDEALKLAEEIGYPLVVRP
SYVLGGRAMEIVHDGRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCISDGGKVFIG
GVMEHIEQAGVHSGDSACSLPPYSLSDATVDEIKRQTAAMAKGLNVVGLMNVQFAIQNVD
GKDVIYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDKQGIKSEVKPPYFSVKE
AVFPFNKFPGIDPILGPEMRSTGEVMGVGKTFGEALFKSQLGAFIKLPKSGTVLLTVKDS
DKPKAVEVAKLLHQLGFPMVATKGTAAAIEAAGLPVKLVNKVKDGRPHIVDFIKNGEISL
VFTTVDETRTAIADSRSIRTSAQANGVTYYTTISAARAVMDGLLASQNGNKDSLEVYSLQ
NLHGTLI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtagcgacattaagagcattttgattattggtgctggaccaattgtgatt
ggtcaagcatgtgagtttgactattcaggtgcgcaagcttgtaaagcattgcgtgatgaa
ggttataaagtcattttggttaacagcaaccctgcaaccatcatgacggatcctgagatg
gctgatgtaacttacattgagccaattacttgggaagtcgttgaacgcattattgcaacc
gagaagccagatgcgattttgccaacaatgggcggacaaaccgccttgaattgcgcgcta
gatttacatcgcaatggcgtattaaaaaaatatggctgtgaattgattggcgcctctccc
gaagcgattgataaggcagaagatcgtcaaaagtttaaagatgccatgactaagattggt
ctcggatctgcaaagtctggcattgcgcattctatggatgaagctcatgaagttcagcag
cgcattcaaaaggagacgggtagttcaggattcccggtggttattcgtccctcattcacc
atgggtggatcaggcggtggtattgcttataaccgcgaagagttcgaagagatttgcaag
cgcggccttgacctttcgccaacacgtgaactcttgattgaagaatcactcttgggttgg
aaagagttcgaaatggaggtggtgcgcgatcgtaacgacaattgcatcattgtttgctcc
attgaaaacttggatccgatgggtgtgcatacaggtgactcgattaccgttgcccctgca
cagactctcacagataaagaatatcaattgatgcgaaatgcatcgattgccgttctgcgt
gagattggcgtagatacgggcggttcaaacgttcagttctcaatcaatccagtagatgga
cgcatgattgtgattgaaatgaaccctcgtgtttctcgctcatctgcattggcctctaaa
gcaactgggttcccaatcgctaagattgccgccaagcttgctgttggttacacattggat
gaattgaagaacgatattactggtggcgcaacaccagcttcatttgaaccatctattgac
tatgttgtcaccaagattccacgtttcgcatttgagaaatttcctcaagccgattctcgt
ttaaccacacagatgaagtctgttggtgaagtgatggcaattggtcgcacatttcaagaa
tccttccagaaggccctgcgtgggcttgaagtcggcgtagatggtttggacgaagtctcc
accgatcttgatgacatcatcaatgaaatcaatgagcctggtcctgaccgtatttggtat
ctcgcagatgcattccgcatgggaatggggctcgatgaggtctatagcgaaaccaaaatt
gatccttggttcttagagcagattgaagagctcatcacaattgaggctgaactcaaacag
cgtaaggtagacggcctatcggcagcagagctccgctttgtgaagcaaaggggattctcg
gataggcgtttagcaaaattacttagcgttgatgcatcctctgtgcgtgctatccgtcat
cgcttaaaggtagtgcctgtctataagcgtgtggatacctgtgccgcagaattctcaacc
aatacagcctatatgtactctacatatgaagctgagcatggtgaatgtgaatcacgtcca
actgataagcaaaagattatggtgttgggtggcggccctaaccgaattggtcaaggtatt
gagtttgactattgctgcgtacatgccgcattggcaatgcgcgatgatggttatgaaacc
atcatggttaattgcaacccagaaacagtttctaccgactatgacacttcagatcgtttg
tacttcgagcctttaacgttggaagatgtgctggaaatcgtcgccaaagaaaaaccaaag
ggcgtgatcgttcagtatggaggacaaaccccattgaaactcgctttggatctagagcga
aatggcgttccaatcatcggtacatctcccgacatgattgatgcggcagaggatcgcgag
cgcttccagaagctcctgcatgatttaggattgcgtcaacctccaaatcgtactgcgcgt
actgaggatgaggccctaaagcttgcggaagagattggctatcccttagttgttcgtcca
tcgtatgttcttggcggtcgagcaatggaaatcgttcatgatggtcgcgacctagagcgt
tatatgcgtgaggcagttaaagtctctcacgattcccctgtcttgctagatcgcttcttg
aatgacgcgattgaatgcgatgtcgactgtattagcgatggcggtaaagtctttattggc
ggcgtcatggagcatattgaacaagccggcgttcactctggtgactctgcgtgttctttg
cctccgtattctttatcagacgctactgttgatgaaattaagcgtcaaacagctgcaatg
gcaaagggtctcaatgttgttgggttgatgaacgtgcagtttgcgattcagaatgtagat
ggcaaagacgttatttatgttctagaagtaaacccacgtgcatcacgtactgttccattt
gtgtctaaagccactggtttgcaattagccaaaattgcggcgcgttgcatggtaggccag
tctttagataaacagggcattaagtctgaagtaaagcccccatacttctcggtcaaagag
gcagtattcccattcaataagttccccggaattgatcccatactcggaccagagatgcga
tctaccggtgaagtcatgggtgtgggtaaaacttttggcgaggccttatttaagtctcag
ttgggtgcattcattaagctacctaagagcggtaccgtgttgttgactgtaaaagatagt
gataaaccaaaagcagtagaggttgccaagcttttgcatcaattgggattcccaatggtc
gctacaaaaggtaccgctgctgccattgaggctgctgggttaccagtgaaattggtcaac
aaggtaaaagacgggcgtccacatattgtggatttcattaagaatggtgagatttcattg
gtgtttactactgttgatgagacccgtactgccattgccgactcacgttcaattcgtact
agcgcgcaagcaaatggtgtgacgtattacacaaccattagcgcagctagggcggtgatg
gatggattgctggcatcgcagaatggcaacaaggactctttagaggtttattctcttcag
aatttacatggaacgcttatttaa
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