Polynucleobacter tropicus: DCO17_05670
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Entry
DCO17_05670 CDS
T08318
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00061
Fatty acid biosynthesis
ptrp00071
Fatty acid degradation
ptrp01100
Metabolic pathways
ptrp01212
Fatty acid metabolism
ptrp02024
Quorum sensing
ptrp04146
Peroxisome
Module
ptrp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DCO17_05670
00071 Fatty acid degradation
DCO17_05670
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DCO17_05670
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCO17_05670
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptrp01004
]
DCO17_05670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrp04147
]
DCO17_05670
Enzymes [BR:
ptrp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DCO17_05670
Lipid biosynthesis proteins [BR:
ptrp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DCO17_05670
Exosome [BR:
ptrp04147
]
Exosomal proteins
Exosomal proteins of breast milk
DCO17_05670
Exosomal proteins of breast cancer cells
DCO17_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QKM64761
UniProt:
A0A6M9PWW1
LinkDB
All DBs
Position
complement(1102424..1104091)
Genome browser
AA seq
555 aa
AA seq
DB search
MSNSKPWIKNYPPGVDPEIAPLTYSSLAEFFETAFDRFGSRKAAESMGKSFTYRQIDHLS
KDFASYLQSLNLEKGARIALMYPNVIEYLIAMIGVLRAGYVVVNINPLYTARELEAQLLD
SGATVLVLMENFAHTYEQIATKTSVSKVIVSSPGELMGLKGYVINWVARNVKRLVPKWNI
DHIGFKQALEIGQKRSFDQPAIELYDIAFLQYTGGTTGISKGAVLLHRNILSNVAQIEMW
LNPGLKKADQQLQFLCALPMTHIFALTACAFLGMAKGAMLILVANPRDIDGFINLLIKHP
KINIFPGVNTLFHALIHRPEFKKVKFTNLLVTIGGGMAVHRKTADHWQAITGCPIAQGYG
LSETSPVVCVNSPLETHFTGHIGPPMPSTDVVILDDDEVQLPDGTPGEICIKGPQVMAGY
WNKPEETAHCMTADGYFKSGDIGLITESGHIQIVDRKKDMIVVAGFKVFPNDVEDVLAQM
PGVRECAVIGVPHRKLGEIVKAYVVKSDHHLTEADVLQYCKDTLTSYKRPRKVVFAHELP
KSNVGKILRRELRNL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaaaaccttggattaaaaattatccccctggtgtcgatccagaaattgct
ccgcttacatattcatctttagcggaattctttgaaacggcatttgaccggtttggcagt
cgcaaagctgctgaatcaatgggtaaatcttttacttaccggcagatagatcatttatca
aaagactttgcatcttatttgcagagcttgaacttagagaagggtgcacgtattgccctg
atgtatccaaatgtcatcgaatatctaattgcgatgattggcgtgttgcgggctggttac
gtagtagtaaatatcaatcctttatatacagcacgcgagctagaggcgcagctactcgat
agtggggcaaccgtactagtcttaatggaaaattttgctcacacctatgagcaaattgcg
actaagacctccgtaagtaaagtaatcgtgagtagtcccggtgaattaatgggtcttaaa
ggttacgtcattaattgggtcgcgcgtaatgtcaaacggcttgtcccaaaatggaatatc
gaccatattggctttaaacaggcactcgaaattgggcaaaaaagatcatttgatcagcct
gctattgaattatatgacattgcctttttgcaatacaccggtggaactactggtatttct
aagggcgcagtattgcttcatagaaatatcctgtcaaatgtggcgcaaattgaaatgtgg
ttgaatccagggctcaagaaggcggatcagcaattacaatttttatgtgcgctgccgatg
acgcatatctttgcattaactgcttgcgcatttcttgggatggcaaaaggtgccatgctt
attttggtagccaatcctcgagatattgatggattcataaatttgcttatcaagcatccc
aaaatcaatatctttcctggtgtgaatactttgtttcatgcgctgattcaccgaccagag
ttcaaaaaagtgaaatttactaatttactggtaacgatcggcggtggcatggctgttcat
cgtaagactgctgatcattggcaggctataacagggtgcccaattgctcaagggtatggt
ttatcagaaacctcgccggttgtttgtgtaaatagtccgctagaaactcatttcacggga
catattggccctccgatgcctagtacggacgtagttatcttggatgatgatgaagttcag
ttgcccgatggtactccaggagagatctgtatcaaagggcctcaggtgatggctggctat
tggaataagcctgaagagacggcgcactgtatgacggctgatggatactttaaatctggt
gacattggtctcattaccgaaagcggacatatccagatcgtggatcgcaagaaggacatg
attgttgtcgctggattcaaagtgttcccaaatgatgttgaagatgtcttagcgcaaatg
cctggtgtgcgagagtgtgcagtaattggcgtcccgcatcgcaagctaggcgagattgtt
aaagcatatgtcgtcaagtctgatcatcatttgacggaggcagatgtcttgcaatattgc
aaagatacgcttacgagttacaagagacccaggaaggtagtgtttgcacacgaacttcct
aagtccaatgtaggaaagatattgcgtcgagaactccgaaatctctaa
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