Polynucleobacter tropicus: DCO17_06170
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Entry
DCO17_06170 CDS
T08318
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00020
Citrate cycle (TCA cycle)
ptrp00190
Oxidative phosphorylation
ptrp00650
Butanoate metabolism
ptrp00720
Other carbon fixation pathways
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01200
Carbon metabolism
Module
ptrp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptrp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptrp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCO17_06170 (sdhC)
00650 Butanoate metabolism
DCO17_06170 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
DCO17_06170 (sdhC)
00720 Other carbon fixation pathways
DCO17_06170 (sdhC)
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GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
DUF6814
DUF3810
Motif
Other DBs
NCBI-ProteinID:
QKM64848
UniProt:
A0A6M9PZQ1
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All DBs
Position
complement(1193185..1193604)
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AA seq
139 aa
AA seq
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MVDAQQNVKKDRPVYRNIGLAQLVKYRLPWAGKVSILHRISGAVLFLLLPFILYLFDQSL
ASELSYQKFQAFTGNVLVKIICLGLIWCFLHHFCAGIRYLLLDLEIGVEKSESNRSAIIV
LVIGLALTAIVGLKLFGLY
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgcacagcaaaacgtaaaaaaagatagaccggtttatcgaaatattggtcta
gcccagttggtgaaatatcgccttccttgggccggtaaagtttccattcttcaccgtatt
agcggagcagttttgttcctcttgttgccgtttattttgtacctctttgatcaaagcctt
gcttctgaattgagttaccaaaaattccaagcgttcacaggtaatgtcttagtaaaaatt
atttgcttgggattgatttggtgtttcttgcaccacttctgcgctggcattcgttacctc
ttgctcgatctcgagatcggagtagagaagtcagagtccaatcgttcagcaatcatcgtc
ttggtgattggcctggctttgactgcgatagttggtcttaaattattcggcttgtactaa
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