Polynucleobacter tropicus: DCO17_06310
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Entry
DCO17_06310 CDS
T08318
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00010
Glycolysis / Gluconeogenesis
ptrp00020
Citrate cycle (TCA cycle)
ptrp00260
Glycine, serine and threonine metabolism
ptrp00280
Valine, leucine and isoleucine degradation
ptrp00310
Lysine degradation
ptrp00380
Tryptophan metabolism
ptrp00620
Pyruvate metabolism
ptrp00630
Glyoxylate and dicarboxylate metabolism
ptrp00640
Propanoate metabolism
ptrp00670
One carbon pool by folate
ptrp00785
Lipoic acid metabolism
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01200
Carbon metabolism
ptrp01210
2-Oxocarboxylic acid metabolism
ptrp01240
Biosynthesis of cofactors
Module
ptrp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptrp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptrp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DCO17_06310 (lpdA)
00020 Citrate cycle (TCA cycle)
DCO17_06310 (lpdA)
00620 Pyruvate metabolism
DCO17_06310 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DCO17_06310 (lpdA)
00640 Propanoate metabolism
DCO17_06310 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DCO17_06310 (lpdA)
00280 Valine, leucine and isoleucine degradation
DCO17_06310 (lpdA)
00310 Lysine degradation
DCO17_06310 (lpdA)
00380 Tryptophan metabolism
DCO17_06310 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCO17_06310 (lpdA)
00670 One carbon pool by folate
DCO17_06310 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrp04147
]
DCO17_06310 (lpdA)
Enzymes [BR:
ptrp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DCO17_06310 (lpdA)
Exosome [BR:
ptrp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DCO17_06310 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Pyr_redox_3
Biotin_lipoyl_2
FAD_oxidored
GIDA
AlaDh_PNT_C
FAD_binding_2
GCV_H
NAD_binding_8
Thi4
HI0933_like
NQRA_N
3HCDH_N
HlyD_D23
FAD_binding_3
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QKM64874
UniProt:
A0A6M9PR35
LinkDB
All DBs
Position
complement(1217858..1219651)
Genome browser
AA seq
597 aa
AA seq
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MAKQNILVPDIGDYSDVPVIEVLVKVGDVVQKEQPLLVLESDKATMEVPADAAGTITSIA
VKLGDKVSKGSVIAEIEASAGTTPASAPAPAAPKPATPATAPAAIASAPKAGQYNGKVDH
ECETLVLGAGPGGYSAAFRSADLGMNTVLIERYATLGGVCLNVGCIPSKALLHTAAVMDE
VKTMAKHGITFGAPKIEIDQLRGYKESVIAKLTGGLAGMAKARKVKVVRGLGKFLDANHV
EVELTNGSGQDLTGQKEVVRFQKAIIAAGSQPVKLPFLPEDPRIVDSTGALLLKSIPKRM
LVIGGGIIGLEMATVYSTLGSRIDIAEMMDGLMAGADRDLEKVWEKFNAGRFENIMLKTR
AAKAEVKPDGIQVTFEGENAPAQPQTYDLVLVAVGRTPNGKKIAADKAGVQVDERGFIPV
DKQMRTNVPNIFAIGDLVGQPMLAHKAVHEGHVAAEAAAGEKSYFDAKQIPSVAYTDPEV
AWAGLTEEQCKTQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDAKTHRIIGGGIVGTH
AGDLIGEVCLAIEMGADAVDIGKTIHPHPTLGESVGLAAEAAHGHCTDLPPVKKKSA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaaacattctagttccagatattggtgattactcagatgttcctgtcatt
gaagtattggtgaaggtgggtgatgtggttcaaaaagagcagccattactcgtcctcgag
tctgacaaggcaacgatggaagttcctgcggatgccgcaggtacgattactagcattgcc
gtgaagttaggcgacaaggtgagcaagggttctgtgatcgctgaaatcgaggcaagtgct
ggcactacaccggcttcagcccctgcaccagctgcgcctaaacccgcaaccccagcaaca
gctccggctgcaattgcttctgcaccaaaagcggggcagtacaacgggaaggtagatcat
gagtgcgagacattagtgctcggcgctggtcccggcggatacagcgcggcatttcgcagt
gctgatttgggtatgaataccgttttaatagagcgttatgcaaccctaggtggcgtgtgc
ttaaacgttggatgtattccatcaaaagcattacttcataccgctgctgtcatggatgaa
gtaaagacaatggctaagcatggcatcacatttggtgcgccaaagattgagattgatcaa
ttacgtggctataaagagtcagtgattgcaaaattaactggcggattagctggtatggct
aaggcacgcaaagtgaaggtagtgcgcggtcttggtaagttcttagatgcaaaccatgtg
gaagttgaattaaccaatggttcaggccaggacttaactgggcaaaaagaagtggtacgt
tttcagaaggcaatcattgctgctggtagccagcccgtaaaactacctttcttacctgaa
gatcctcgtattgttgatagtacaggtgccttattgctcaagagtattccaaaaagaatg
ctggtaattggtggcggtattattggtttagaaatggctacggtttacagcacgcttggc
tcgcgtattgatattgccgagatgatggatggtttgatggcgggcgccgaccgcgacctt
gagaaggtttgggagaagttcaacgctggtcgttttgaaaacatcatgctcaagactcga
gcagcaaaagctgaagtaaagcctgatggtattcaggtgacatttgaaggcgagaacgca
cctgctcaaccacagacctatgatttggtattggttgcagtagggcgtactccaaacggc
aaaaaaatcgccgcagataaagcaggcgttcaagtggacgagcgcggatttattccggtt
gataagcagatgcgcaccaatgtaccgaacatcttcgcaattggtgacttagttggtcaa
ccaatgctggctcataaagcggtgcatgaaggtcatgtggctgccgaggctgccgctggt
gagaagtcttacttcgatgctaagcaaattccttctgttgcgtacacggacccagaggtt
gcttgggcaggcctgactgaggaacaatgcaagacccaaggtattgcgtatgaaaaaggc
ttattcccgtgggcagctagtgggcgcgctattgcaaacggtcgcgatgaaggtttcacg
aaactgatttttgatgctaagactcatcgcattattggtggcggtatcgtcggcacacat
gctggagacttgatcggagaggtatgcctcgcaatagagatgggtgctgatgcggttgat
attggaaaaactattcatccgcatccaaccctgggtgagtcagttggcttggctgcagaa
gcggcgcatggtcattgcacagacttgcccccggtcaagaagaagtctgcttaa
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