KEGG   Polynucleobacter tropicus: DCO17_06310
Entry
DCO17_06310       CDS       T08318                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ptrp  Polynucleobacter tropicus
Pathway
ptrp00010  Glycolysis / Gluconeogenesis
ptrp00020  Citrate cycle (TCA cycle)
ptrp00260  Glycine, serine and threonine metabolism
ptrp00280  Valine, leucine and isoleucine degradation
ptrp00310  Lysine degradation
ptrp00380  Tryptophan metabolism
ptrp00620  Pyruvate metabolism
ptrp00630  Glyoxylate and dicarboxylate metabolism
ptrp00640  Propanoate metabolism
ptrp00670  One carbon pool by folate
ptrp00785  Lipoic acid metabolism
ptrp01100  Metabolic pathways
ptrp01110  Biosynthesis of secondary metabolites
ptrp01120  Microbial metabolism in diverse environments
ptrp01200  Carbon metabolism
ptrp01210  2-Oxocarboxylic acid metabolism
ptrp01240  Biosynthesis of cofactors
Module
ptrp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ptrp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptrp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:ptrp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DCO17_06310 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DCO17_06310 (lpdA)
   00620 Pyruvate metabolism
    DCO17_06310 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DCO17_06310 (lpdA)
   00640 Propanoate metabolism
    DCO17_06310 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DCO17_06310 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DCO17_06310 (lpdA)
   00310 Lysine degradation
    DCO17_06310 (lpdA)
   00380 Tryptophan metabolism
    DCO17_06310 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DCO17_06310 (lpdA)
   00670 One carbon pool by folate
    DCO17_06310 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptrp04147]
    DCO17_06310 (lpdA)
Enzymes [BR:ptrp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DCO17_06310 (lpdA)
Exosome [BR:ptrp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DCO17_06310 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Pyr_redox_3 Biotin_lipoyl_2 FAD_oxidored GIDA AlaDh_PNT_C FAD_binding_2 GCV_H NAD_binding_8 Thi4 HI0933_like NQRA_N 3HCDH_N HlyD_D23 FAD_binding_3 Peptidase_M23
Other DBs
NCBI-ProteinID: QKM64874
UniProt: A0A6M9PR35
LinkDB
Position
complement(1217858..1219651)
AA seq 597 aa
MAKQNILVPDIGDYSDVPVIEVLVKVGDVVQKEQPLLVLESDKATMEVPADAAGTITSIA
VKLGDKVSKGSVIAEIEASAGTTPASAPAPAAPKPATPATAPAAIASAPKAGQYNGKVDH
ECETLVLGAGPGGYSAAFRSADLGMNTVLIERYATLGGVCLNVGCIPSKALLHTAAVMDE
VKTMAKHGITFGAPKIEIDQLRGYKESVIAKLTGGLAGMAKARKVKVVRGLGKFLDANHV
EVELTNGSGQDLTGQKEVVRFQKAIIAAGSQPVKLPFLPEDPRIVDSTGALLLKSIPKRM
LVIGGGIIGLEMATVYSTLGSRIDIAEMMDGLMAGADRDLEKVWEKFNAGRFENIMLKTR
AAKAEVKPDGIQVTFEGENAPAQPQTYDLVLVAVGRTPNGKKIAADKAGVQVDERGFIPV
DKQMRTNVPNIFAIGDLVGQPMLAHKAVHEGHVAAEAAAGEKSYFDAKQIPSVAYTDPEV
AWAGLTEEQCKTQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDAKTHRIIGGGIVGTH
AGDLIGEVCLAIEMGADAVDIGKTIHPHPTLGESVGLAAEAAHGHCTDLPPVKKKSA
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggctaagcaaaacattctagttccagatattggtgattactcagatgttcctgtcatt
gaagtattggtgaaggtgggtgatgtggttcaaaaagagcagccattactcgtcctcgag
tctgacaaggcaacgatggaagttcctgcggatgccgcaggtacgattactagcattgcc
gtgaagttaggcgacaaggtgagcaagggttctgtgatcgctgaaatcgaggcaagtgct
ggcactacaccggcttcagcccctgcaccagctgcgcctaaacccgcaaccccagcaaca
gctccggctgcaattgcttctgcaccaaaagcggggcagtacaacgggaaggtagatcat
gagtgcgagacattagtgctcggcgctggtcccggcggatacagcgcggcatttcgcagt
gctgatttgggtatgaataccgttttaatagagcgttatgcaaccctaggtggcgtgtgc
ttaaacgttggatgtattccatcaaaagcattacttcataccgctgctgtcatggatgaa
gtaaagacaatggctaagcatggcatcacatttggtgcgccaaagattgagattgatcaa
ttacgtggctataaagagtcagtgattgcaaaattaactggcggattagctggtatggct
aaggcacgcaaagtgaaggtagtgcgcggtcttggtaagttcttagatgcaaaccatgtg
gaagttgaattaaccaatggttcaggccaggacttaactgggcaaaaagaagtggtacgt
tttcagaaggcaatcattgctgctggtagccagcccgtaaaactacctttcttacctgaa
gatcctcgtattgttgatagtacaggtgccttattgctcaagagtattccaaaaagaatg
ctggtaattggtggcggtattattggtttagaaatggctacggtttacagcacgcttggc
tcgcgtattgatattgccgagatgatggatggtttgatggcgggcgccgaccgcgacctt
gagaaggtttgggagaagttcaacgctggtcgttttgaaaacatcatgctcaagactcga
gcagcaaaagctgaagtaaagcctgatggtattcaggtgacatttgaaggcgagaacgca
cctgctcaaccacagacctatgatttggtattggttgcagtagggcgtactccaaacggc
aaaaaaatcgccgcagataaagcaggcgttcaagtggacgagcgcggatttattccggtt
gataagcagatgcgcaccaatgtaccgaacatcttcgcaattggtgacttagttggtcaa
ccaatgctggctcataaagcggtgcatgaaggtcatgtggctgccgaggctgccgctggt
gagaagtcttacttcgatgctaagcaaattccttctgttgcgtacacggacccagaggtt
gcttgggcaggcctgactgaggaacaatgcaagacccaaggtattgcgtatgaaaaaggc
ttattcccgtgggcagctagtgggcgcgctattgcaaacggtcgcgatgaaggtttcacg
aaactgatttttgatgctaagactcatcgcattattggtggcggtatcgtcggcacacat
gctggagacttgatcggagaggtatgcctcgcaatagagatgggtgctgatgcggttgat
attggaaaaactattcatccgcatccaaccctgggtgagtcagttggcttggctgcagaa
gcggcgcatggtcattgcacagacttgcccccggtcaagaagaagtctgcttaa

DBGET integrated database retrieval system