Polynucleobacter tropicus: DCO17_06610
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Entry
DCO17_06610 CDS
T08318
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03030
DNA replication
ptrp03430
Mismatch repair
ptrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCO17_06610 (dnaX)
03430 Mismatch repair
DCO17_06610 (dnaX)
03440 Homologous recombination
DCO17_06610 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrp03032
]
DCO17_06610 (dnaX)
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_06610 (dnaX)
Enzymes [BR:
ptrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCO17_06610 (dnaX)
DNA replication proteins [BR:
ptrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCO17_06610 (dnaX)
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCO17_06610 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_18
AAA_30
TsaE
AAA_2
AAA_24
AAA_assoc_2
Glyco_tranf_2_5
nSTAND3
Nitroreductase
AAA_19
SKI
Motif
Other DBs
NCBI-ProteinID:
QKM64928
UniProt:
A0A6M9PZY4
LinkDB
All DBs
Position
complement(1288519..1290204)
Genome browser
AA seq
561 aa
AA seq
DB search
MTALALARSWRPKTFSELIGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTISRIMAK
ALNCTGADGSGKMTSEPCGKCPACMEIDAGRFVDYIEMDAASNRGVDDIASLLEKAAYAP
SSGRYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAEKVDYEVNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDCLIAKDGATLLAVANEMGERSMSFSLALQDLSSLLQKIAAA
QVVPESVLDDWPEAPEIRRLAGQLTKEEAQLFYQITITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGSSAGSVSGSAPSAPPVNTARPVSTSPAAPANRSAPAAPAPSAPKASAQAPVAAP
APATQTTPANTGPVDRPDWHGLMRQLPVRGLVQQLAFQTELQDWNDSPNGIKAVVVTPMP
QLASDSSIARLADALTAHFGKTVKVVIEKGEVEGKTVAKVDAQIHQEKRLNAEQMIAADP
FIQQLEKEFGAKVVGGSVKPL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactggcattagcccgttcgtggcgccccaaaacattctctgaactcattggt
caagaccatgtggttaaagctttaacccatgcattggatcaaggtcgtttgcatcatgct
tggttatttacgggtacccgtggagtaggcaagaccacgatttctcgaatcatggcaaaa
gcactcaattgcactggtgctgatggttctggaaagatgacttcagagccttgcggaaaa
tgtccagcttgcatggaaattgatgccggtcgttttgttgactatatcgagatggatgcg
gctagtaatcgtggtgtggacgatattgcttctttattagagaaggcggcatacgcgcca
agcagtggtcgctataaggtgtacatgattgacgaggtgcatatgctcaccaatcatgcc
tttaatgccatgctcaagaccttagaagagccgccagagcacgtcaaatttattctggcg
actactgatccgcaaaaaataccagtcaccattttgtctcgctgcttgcagttcaacctc
aagcaaatgccagtaccgctcatcgttgagcatttagaaaaagtacttgctgcagagaaa
gtcgattacgaagtcaatgccttgcgtgtgttggcaaaagcagcccaaggttcgatgcgt
gatgccctctcacttacagatcaagccattgcctatgccgctggcaaagttaccgaagaa
tctgtgcgcgggatgcttggcacactagatgatgcttatctcattcggattttggattgc
ttaattgctaaagatggcgcaacccttttagcggttgctaatgaaatgggtgagcgcagt
atgtctttttcattggcattgcaagatttatcgagtttgttgcaaaagattgcagcagca
caagtcgtgcctgagtctgtattagacgattggccagaagcaccagagattcgtcgctta
gcaggacaactgactaaagaagaggcgcagctcttttatcaaattaccattactagtcgc
ccagatttatcactcgcgccggatgagcaaactggctttgccatgactttgttgcgcatg
ttggcgtttcgtccaggcagtagtgcaggaagcgtaagtggatctgcaccatcagcgcca
ccagtaaacacagcgcgtccagtatcaacatcgccggcagcaccagcaaaccgttccgct
cctgcagcgcccgcaccttcagcacccaaggcttctgctcaagcgcctgtcgctgctcca
gcaccagctacacaaactactcctgcaaacactggcccagtagatcgtcctgattggcat
ggcttaatgcgccaactgcctgtgcgcggtttagtgcaacagttagcatttcagacggag
ttgcaagattggaatgattcacctaatggcattaaggcagtcgttgtcacgccgatgcca
caactagcttcggattcatcaattgcgcgtttggctgatgcactgactgctcactttggc
aagactgtcaaagtcgtcattgaaaaaggtgaagtagagggcaagaccgtagcgaaggta
gatgcgcagatacaccaagagaaaagattaaatgcagaacaaatgattgctgccgatcca
tttattcagcagttagaaaaagagtttggtgccaaagtggttggtggctcagtaaagccg
ctatga
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