Polynucleobacter tropicus: DCO17_07525
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Entry
DCO17_07525 CDS
T08318
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
ptrp
Polynucleobacter tropicus
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ptrp03029
]
DCO17_07525 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptrp02000
]
DCO17_07525 (bamA)
Mitochondrial biogenesis [BR:
ptrp03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
DCO17_07525 (bamA)
Transporters [BR:
ptrp02000
]
Other transporters
Pores ion channels [TC:
1
]
DCO17_07525 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
YadA_anchor
CppA_N
Motif
Other DBs
NCBI-ProteinID:
QKM65095
UniProt:
A0A6M9Q1W4
LinkDB
All DBs
Position
complement(1464401..1466716)
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AA seq
771 aa
AA seq
DB search
MRFLARLILLLSIGLSLHVHAADSFVVKDIRVEGLQRVEPGTVFSYLSVQVGDTFTEEKG
AEAIKALYSTGFFRDVQIQAQGDVLIVIVDERPTISRMEFTGMKEFQPESIRKSLQVVGV
AEARFYDKALIDKAEQELKRAYVGKGMFAAEVVATVTPVERNQVAVYFNVDEGPVAKIEE
INFIGNAAFSEGTLRSEMQLKTGGWLSWYSKDNLYSKQKLMADLEAIRSYYLNRGYLEFT
YEATQVSITPDKKAIYLTISINEGKKFTVRDVRLAGELLGKESELKELIVLKSGDTYSSA
LLTQSTKAIADVLGAYGYAFATINPQPDIRRDLSEVDVTLVIDPGRRVYVRKVEISGNAK
TRDMVIRREMRQFESSWFDSEKIDLSKKRLGRLGYFTETDITTEDVPGSPDQVDVNVKVT
EKPTGAVTVGAGFSSTEKLILSAGVNQDNAFGTGTSVGLNASLGKINQNLTLSNYDPYFT
EEGISRYTDLYYRSSKPLYYVGDPDYQIKSVGTNIKFGVPYTEVDRVFFGSGVEAFQIQT
TENTPQPYLNYAMSYGIASPGYPGTLTTYNVPLTVGWARDGRDSALIPSDGSLQQLSAEA
GTPVGNMTFYRLFGQYQKYHSFSKGNILSFNGEVGYGQAYGNNPYPITKNYYVGGIGSVR
GYSPGSLGPQYYNTIIGAWQPTGGQSKIVTNLEYTVPVPGSGVDKTLRVFGFADGGNAFG
QNINLVLRYSYGLGLSWISPLGPLKFSYGIPYKAQPTDNIQRLQFQVGTAF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttttagcaagactcattctgcttttatctattggattgagtttgcatgttcat
gcagcagattctttcgttgttaaagatatccgagtagagggtttgcagcgggtagagcct
ggaaccgtattcagttatttgtctgtgcaggttggcgacacatttacagaagaaaagggt
gctgaagcaattaaagctctttacagcacaggattctttagggatgtgcaaattcaagcg
cagggtgatgtccttattgtgattgttgatgagcgtcccaccatctcgcggatggagttt
acgggtatgaaagaatttcagcccgaaagcattcgaaaatcgttgcaagttgttggcgtt
gctgaagctcgtttttatgataaagccttaatagacaaggctgagcaagaattgaagcgt
gcctacgttggaaaaggtatgtttgctgccgaggtagtggctacagtaactccggttgag
cgtaatcaagtggccgtctatttcaatgttgatgaaggccctgttgccaaaattgaagaa
attaactttattggtaatgcagcttttagtgagggcactcttagaagtgagatgcagctt
aaaactggcggttggctgtcttggtatagcaaagataatttgtattcgaagcaaaaattg
atggcagatctggaggctatccgctcatactatttgaatcgtggttacttggaatttact
tatgaagccactcaagtttcgattactcctgataagaaggcaatttacttaaccattagt
atcaatgagggtaaaaaatttaccgtcagagatgttcgtttggctggcgagttattaggt
aaagaatctgagcttaaggaattaatcgtattgaagtctggcgacacctattcatctgct
ctattaacgcagagtacaaaagcgattgctgatgttctaggtgcctatgggtatgcattt
gccactatcaatccacagccagatattcgtcgcgacctatccgaggtcgatgtcacttta
gtgattgatccaggtcgtcgtgtatatgtgcgaaaggttgagatctcgggaaatgcgaag
acgcgtgacatggtgattcgccgcgaaatgcgtcagttcgagagctcttggtttgatagt
gaaaaaattgatttatctaaaaaacgacttggccgtctagggtacttcactgaaacagac
attacaactgaagatgtgcctggttccccggatcaggtggacgtcaatgtgaaagtaact
gaaaaacctaccggggcagtgacggttggcgctggattctcttctactgaaaaattaata
ttatctgccggcgtcaatcaggataatgcttttggtactggaacttcagttggtcttaat
gcctcattgggaaaaataaatcaaaacttaaccctctctaattacgatccctattttact
gaagagggaattagtcgctataccgatttgtactatcgatcatcaaagcctttgtattac
gtcggcgatcctgattaccaaattaaatccgttggtacaaacattaaatttggagtgcca
tacactgaagttgaccgagtatttttcggatcgggtgttgaggctttccaaattcagact
acggaaaatactccgcagccttatctaaattatgcaatgagctatggaattgcatctcct
ggataccctggtaccttgacaacctataacgtccccttaacagttgggtgggcgcgcgat
ggtcgtgatagcgcgctaattccgtcggatggttctttgcagcaattgtcagcagaagct
ggaacgcctgttgggaatatgaccttttatcgtttatttggtcagtatcagaaatatcac
tctttctctaagggaaacatcctctcatttaacggagaggttggttatggtcaggcttat
ggaaataacccttatccaatcactaaaaactactatgtgggtggtatcgggtctgtgcga
ggatactcgcctgggtcccttgggccacagtactacaacacgattatcggagcttggcag
cctactggtggtcagtcaaaaatcgtaactaatttagagtacacggttccagttcctggg
tctggggtcgataaaaccttgcgagtttttggttttgcggatggcggtaatgcttttggg
caaaatattaatttggttcttagatactcttatggtttgggtttatcatggatatcaccg
cttgggcctctaaagtttagctatggtattccgtacaaggctcagcctacggataatatt
caacgtttgcagttccaggttggtacggcgttttaa
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