Polynucleobacter tropicus: DCO17_07615
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Entry
DCO17_07615 CDS
T08318
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ptrp
Polynucleobacter tropicus
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_07615
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DCO17_07615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
Lon_C
AAA_22
AAA_24
nSTAND3
RecA
SLFN-g3_helicase
AAA_30
TackOD1
Rad51
DUF7125
AAA
NTPase_1
GvpD_bR2
zf-RING_10
AAA_5
DAP3
KdpD
ABC_tran
AAA_14
NACHT
HypA
PAXNEB
DUF7129
AAA_29
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QKM65113
UniProt:
A0A6M9Q7D6
LinkDB
All DBs
Position
complement(1487845..1489209)
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AA seq
454 aa
AA seq
DB search
MAKVKTVYICQSCGGTSAKWQGQCPSCQSWNTMEEGLPETTSNSRFQGLAQSLPRQKLST
ITAEDLPRFSTGVEEFDRVLGGGLVPGGVVLLGGDPGIGKSTLLLQALAEMSAAGMNVLY
SSGEESAAQIALRAKRIALDAPQLEVLAEIQLEKLISIMDTVKPQVLVVDSIQTLYSEVL
SSAPGSVAQVRECAAQLTRAAKASGICVLMVGHVTKDGHLAGPRVLEHIVDTVLYFEGDT
HSSFRLIRSIKNRFGAVNELGVFAMTEKGLRGVTNPSAIFLSQHEQMVPGACVLVTQEGS
RPLLVEIQALVDTAHVPNPRRLAVGLEQARLAMLLAVLHRHAGVACFDQDVFLNAVGGVK
ISEPAADLAVLLAIQSSIRNRALPKELIVFGEVGLAGEIRPCPRGQERLKEAAKLGFTVA
IIPKANMPKTKIPGLRVIPVERIDQAIAAAAELS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagtaaaaacggtttatatctgtcagtcttgtggcggcacttcggcgaagtgg
caaggacaatgcccatcttgtcagtcttggaacacgatggaagagggtttgccagagacg
acatccaactctcggtttcagggtctagcgcaatctttgcctagacaaaagctctcgacg
attaccgctgaagatttgccaagatttagtactggtgtagaagagtttgaccgcgtattg
ggcggtggattggtgcctggtggtgttgtgttgcttggtggtgatcccggcattggtaaa
tccactctgctattgcaggcgcttgctgagatgagtgctgctggaatgaatgttctctat
agcagtggtgaggaatcagccgctcaaattgctttgcgtgcgaagcgaattgcattggat
gcaccacaattagaagttttggcagaaattcagttggagaagctgatttctattatggac
actgttaagccacaagtcttggttgtggactccattcaaactttgtactctgaagtatta
agctccgcccctggctcagttgcgcaggtgagagagtgcgctgctcaattaaccagagcg
gctaaagccagcggcatttgtgtattgatggtgggccatgtcacaaaagatggccatttg
gcgggcccaagggtgttggagcacattgttgataccgtgttgtactttgaaggcgataca
cactcctcgtttcgtttaattcgttctattaagaatcgttttggcgcagtcaatgagcta
ggtgtatttgcaatgactgaaaaaggtttgcggggtgttacaaacccatcagcaattttc
ttgtcgcaacatgagcaaatggttcccggcgcatgtgtgttggttacgcaagagggtagt
agacctctcttagttgagattcaagcgcttgttgatactgcccatgtgcctaatcctcgc
cgcttagccgttggtttggagcaggcacgtttagctatgttgttagcggtcttgcaccgt
catgctggagtagcctgttttgatcaggatgtgttcttgaatgccgttggcggcgtgaag
atttcagagccagctgctgacttggcagtgttacttgcgattcaatcatctattcgtaat
cgcgcattaccaaaagagttaattgtgtttggtgaagtgggcttagcgggagagattcgt
ccatgcccacgcggtcaagagcgtcttaaggaggcggcaaagctgggtttcacagtcgcc
attattcctaaggcaaatatgccaaagacgaaaatccccggattaagagtgattcctgta
gagcgaattgatcaggcgatagctgcagcggccgagttaagctaa
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