Polynucleobacter tropicus: DCO17_07765
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Entry
DCO17_07765 CDS
T08318
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCO17_07765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_07765
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCO17_07765
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCO17_07765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QKM65141
UniProt:
A0A6M9PY10
LinkDB
All DBs
Position
complement(1519972..1522128)
Genome browser
AA seq
718 aa
AA seq
DB search
MIAEMPPKLSKTDAKNEPKVAQKKASSDSPENAGHELDSVKFVSFPDSPYQLYQPFPPAG
DQPAAIDALVEGVEDGLTYQTLLGVTGSGKTFTMANVIARTGRPAIVFAPNKTLAAQLYS
EFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRD
VVIVATVSAIYGIGNPGDYHSMVMTLRPGDKMSQRDILTRLIAMQYERNETDFKRGVFRV
RGDTIDIFPAEHNELALRVESFDDEVESLQFFDPLTGKIRQKIPRFTVYPSSHYVTPRET
VLKAIETIKEELRIRLDEFVKDGKLVEAQRLEQRTRFDLEMLNELGFCKGIENYSRHLSG
AAPGEAPPTLVDYLPNDALMFLDESHVLIGQLNAMYNGDKSRKHTLVEFGFRLPSAMDNR
PLKFTEFETKMRQTIFVSATPADYESQHQGQVVEQVARPTGLVDPEIEVLPASTQVDDLL
SQIHERVKVGERVLVTVLTKRMAEQLTDFLSDNGVKVRYVHSDIDTVERVEILRDLRLGV
FDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVRGKAILYADK
VTDSMRRAMGETERRRSKQIAFNKTHGIEPKGVQKRIKDIIDGVYDVKEKRQEMAVEQER
AHYEDMSEKELSNEIKRLEKQMIAEAKNLEFEKAASTRDRLSKIKEMAFGARSRDLPS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagatgccccctaagttaagcaaaactgacgcaaaaaacgagccaaaagtg
gctcagaaaaaagccagctcggattcccctgaaaatgccgggcatgagcttgattcagtc
aaatttgtcagctttcccgactctccctatcagctataccagccattcccaccagcgggt
gaccaacccgcggctattgatgccctggtagagggggttgaggacggtttgacctaccag
accttattgggggtcaccgggtctggaaaaaccttcacgatggccaatgtgatcgccaga
actgggcgtccagccattgtttttgcccctaataagacccttgcggctcagctttatagt
gaatttagggagtttttccctaaaaacgcggtcgagtactttgttagttactacgactat
taccagccagaagcctacgttcctcagcgtgacctctttattgagaaagattcttccatt
aatgagcacattgaacagatgcgcttatcggcgactaagagtctgttggagcgtcgcgat
gtagtgattgtggcgacagtttcagcgatctacggtattggtaaccctggcgactatcac
agcatggtgatgaccttgcgacccggcgacaaaatgagtcagcgcgatattttgaccaga
ttgattgcgatgcagtatgagcgcaacgaaacggatttcaagcgcggtgtattccgagtg
cgtggcgacacgattgatatcttcccagctgaacataatgaactagcacttcgagtcgaa
tcatttgatgatgaagtggaaagcttgcaattctttgatccgcttactggaaagattcgc
caaaaaattccacgctttacggtttacccaagttcgcactacgtcactcctcgtgaaact
gttttgaaagcgattgaaacgatcaaagaagaattacgaattcgcttggatgaatttgtt
aaagatgggaaattagtcgaagcacagcgtttagagcaacgcacacgttttgatttagaa
atgttgaatgagcttggcttttgcaaaggaattgagaactactctcgccacctatcaggt
gctgcgccaggcgaggccccacctaccttggtggactacttgccgaatgacgctttgatg
tttttagatgagagtcatgtgcttattgggcagttgaatgctatgtataacggcgataag
tctcgtaaacatactttggttgagtttggtttccgcttgccatctgcaatggataatcgc
ccactcaaattcactgaatttgaaaccaaaatgcgtcagacgattttcgtatccgcaact
cctgcggattatgaaagtcaacatcaaggtcaagttgttgagcaggttgctagacctacc
ggtttggttgatcccgaaattgaagtattaccggcgagcacccaggttgatgacttgctc
agtcaaattcatgagcgtgtcaaagttggtgagcgcgttttagtgacggttcttacgaaa
cgcatggcagaacaattgactgactttctctctgacaacggagtgaaagtgcgttacgta
cattcggatatagatactgttgagcgcgttgaaattttgcgcgatcttcgtttaggtgtc
tttgacgtgttagttggcattaacttacttagggagggtttggatatccccgaggtgtct
ttggtagccatcttggatgcggataaagagggtttcttacgctccgagcgatcgcttatt
cagacaatcggccgtgccgctcgaaatgttcgcggtaaagcaatcttgtatgccgataag
gtgactgattccatgcgcagggcgatgggcgagacagagcgacgccgtagcaagcaaatt
gctttcaataaaacccatggcattgagcctaaaggggtccaaaaacgtattaaggacatt
attgacggcgtctatgacgttaaagagaagcgtcaagaaatggctgttgagcaagagcgg
gctcattatgaagatatgagtgagaaggaattgtctaatgaaatcaaacgcttagaaaag
cagatgattgccgaagccaaaaatctcgagtttgaaaaagccgccagtacgcgagatagg
ctctccaagatcaaggagatggcatttggggcgcgatctagggatcttccaagttaa
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