Polynucleobacter tropicus: DCO17_08545
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Entry
DCO17_08545 CDS
T08318
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DCO17_08545 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_08545 (xseB)
Enzymes [BR:
ptrp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DCO17_08545 (xseB)
DNA repair and recombination proteins [BR:
ptrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DCO17_08545 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
MinC_N_1
CC2D1A-B_DM14
Motif
Other DBs
NCBI-ProteinID:
QKM65276
UniProt:
A0A6M9Q4U6
LinkDB
All DBs
Position
complement(1672745..1672978)
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AA seq
77 aa
AA seq
DB search
MASKKSESSKPGLEVQIDPDLRYEQAVKELEKLISDMESGKFSLEETLLAYQRGAALLKH
CQGVLAQVEQQVRVFEA
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaaaagtcagagagttcaaaaccaggccttgaagtccaaatcgacccagat
ctgcgttacgagcaggcagtcaaggagctggagaagctcatttccgacatggagtccggc
aaattttcccttgaagagaccttattagcctatcaacgcggcgcagccctgcttaaacat
tgccaaggcgttcttgctcaagtagagcaacaagtgcgcgtgttcgaggcttaa
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