Polynucleobacter tropicus: DCO17_09015
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Entry
DCO17_09015 CDS
T08318
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCO17_09015 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrp03019
]
DCO17_09015 (groL)
03110 Chaperones and folding catalysts [BR:
ptrp03110
]
DCO17_09015 (groL)
03029 Mitochondrial biogenesis [BR:
ptrp03029
]
DCO17_09015 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrp04147
]
DCO17_09015 (groL)
Enzymes [BR:
ptrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DCO17_09015 (groL)
Messenger RNA biogenesis [BR:
ptrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DCO17_09015 (groL)
Chaperones and folding catalysts [BR:
ptrp03110
]
Heat shock proteins
HSP60 / Chaperonin
DCO17_09015 (groL)
Mitochondrial biogenesis [BR:
ptrp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DCO17_09015 (groL)
Exosome [BR:
ptrp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DCO17_09015 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DCO17_09015 (groL)
Exosomal proteins of breast cancer cells
DCO17_09015 (groL)
Exosomal proteins of colorectal cancer cells
DCO17_09015 (groL)
Exosomal proteins of bladder cancer cells
DCO17_09015 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKM65363
UniProt:
A0A6M9Q7N5
LinkDB
All DBs
Position
complement(1778451..1780103)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAAIGELAKISKPCTTTKEIAQVGSISANSDHSIGQRIAEAMEKVGKEGVITVEDG
KSLDDELEVVEGMQFDRGYLSPYFINQPEKQVAVLDNPYVLLFDKKIANIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQESKGNNGYNA
ASGEYGDLVAQGVIDPTKVTKTALVNAASVAGLLLTTDCAISEAPKEESAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttgtatttggagatagcgctcgtaccaagatggtcgagggtgtc
aatattcttgcgaacgcagtaaaaacaactctcggaccaaaaggtcgtaacgttgttatc
gagcgttcatttggtggcccaaccgttactaaagacggtgtgtctgtagcaaaagaaatc
gaacttaaagataagttgcaaaacatgggcgcacagatggttaaggaagttgcttccaag
actgctgatatcgccggtgacggtacaacaaccgctacagttttggcgcaatctattgtt
cgcgaaggcatgaagtatgttgtatcaggccataacccaatggacctcaagcgtggtatc
gataaggctgtaactgctgctatcggcgaacttgccaagatcagcaagccttgcacaact
actaaagaaattgctcaagtaggctctatctctgcaaatagcgaccatagcattggtcag
cgcattgcagaggcgatggaaaaagtaggtaaagaaggtgtaatcaccgttgaagacggc
aagtctttggatgatgagttagaagtagtagaaggtatgcagtttgatcgtggctacctc
tctccatatttcattaaccagcctgagaaacaagttgctgtattggataacccatatgtg
ctcttgtttgacaaaaagatcgctaacatccgtgatttgctcccagttcttgagcaagtt
gcaaaatctggtcgtccattgctaatcattgctgaggatgttgaaggtgaagccttggca
actttggttgtaaacaatatccgcggcattatcaaaacttgtgctgttaaggccccaggt
tttggtgaccgtcgtaaggcgatgctcgaagatatcgcaatcttgactggcggtactgtt
atcgctgaagaaattggcctcacactcgagaaaactactcttgagcacctcggtcaagcg
aagcgtatcgaagtaggtaaagagaacaccatcatcattgatggcgctggcgatgctaaa
gcaatcgaagcacgcgttaagaacattcgtgtacagattgaagaagctactagcgactac
gacaaagaaaaattgcaagagcgtgttgccaagttggcaggcggtgttgcggtgattcgt
gttggcgctgctactgaagttgagatgaaagagaagaaagctcgtgttgatgacgcattg
catgcaactcgcgcggctgtggaagaaggcattgttcctggtggtggcgtagcattgatt
cgtgcaatgcaaggtatcaaaggtttgaagggcgataacgctgatcaagacgccggtatc
agtatcgtattgcgtgctatgcaagagccactacgtactatcgtgagcaacgctggtgaa
gatgctggtgtggttgttaatgctgtgcaagaaagcaaaggcaataacggttacaacgca
gcttctggtgagtacggtgatctcgtagcacagggtgttattgacccaactaaggttaca
aaaactgcattagtgaatgctgcgtccgttgctggcctgttgttgacaaccgattgcgca
atctccgaagcaccaaaagaagaatctgctggtggcggtatgcctgatatgggtggtatg
ggcggcatgggtggtatgggcggcatgatgtaa
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