Polynucleobacter tropicus: DCO17_09415
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Entry
DCO17_09415 CDS
T08318
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCO17_09415
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptrp01007
]
DCO17_09415
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptrp03016
]
DCO17_09415
03029 Mitochondrial biogenesis [BR:
ptrp03029
]
DCO17_09415
Enzymes [BR:
ptrp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
DCO17_09415
Amino acid related enzymes [BR:
ptrp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DCO17_09415
Transfer RNA biogenesis [BR:
ptrp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DCO17_09415
Prokaryotic type
Other AARSs
DCO17_09415
Mitochondrial biogenesis [BR:
ptrp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
DCO17_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QKM65436
UniProt:
A0A6M9Q576
LinkDB
All DBs
Position
complement(1855541..1857340)
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AA seq
599 aa
AA seq
DB search
MSMRSHNCGQVTDALIGQEVTLSGWVNRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFA
LAEQVRNEYCIQIKGLVRARPAGTENNDLATGKVEVLCHSLVILNASVTPPFQIDDENLS
ETTRLTHRVLDLRRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL
VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETA
FLSELEIRDLFENMIRHIFKKTMNVELPNPFPTMPYSEGMARFGSDKPDLRVSFEFTELT
DLMKDVDFKVFSGAANQAGGRVVGLCVPGGAEISRSEIDDYTQFVSIYGAKGLAWIKVNS
VAEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKIVNDAIGNLRLRIGHS
AWGKEHGLFTEGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLETDPGKCLA
KAYDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAEEAQAKFGFLLDALQYGAPPHGGI
AFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQAAPAA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcgtagccataattgcggccaagtaacagatgcactgatcggtcaagaggtc
acactctcaggctgggtcaatcgtcgtcgtgaccatggaggcgtgatctttattgacttg
cgtgaccgtgaaggttttgtgcaagtggtttgcgatccagaccgtccagaaatgtttgcg
cttgcagagcaggtgcgtaacgagtactgcattcaaattaagggtctagtgcgcgcgcgt
cctgccggcactgaaaataacgatctggcaacaggcaaggttgaggtgctctgccatagc
ttggtgattttgaatgcttcggtaacaccaccatttcagattgatgacgagaacttatcc
gagactacacgtttgacacatcgcgtgctggacttgcgtcgtccacaaatgcaaaagaat
ttgcgtttacgttacaacgttgcaatggagtgccgtcgttatttagatgatgcgggcttt
attgatattgaaactccgatgcttactaagagcacgccagaaggtgcgcgcgactattta
gtgccatcacgtgtgcatgatggtcagttttttgcattgccacaatcacctcagttattt
aagcagttgttgatggtggctggttttgatcgttactatcaaattactaagtgtttccga
gatgaagatttgcgtgcagatcgtcaacctgaatttactcagattgactgtgaaaccgcc
ttcttaagtgaattagagattcgggatttatttgaaaacatgattcgtcatattttcaag
aagaccatgaatgtggaattgccaaatccatttccaacgatgccgtactcagaaggaatg
gcgcgttttggttccgataagcctgatcttcgcgtcagctttgagttcaccgagttaacg
gatttgatgaaagatgttgatttcaaggtattctccggcgctgcaaatcaagctggtggt
cgcgtagttggtttatgcgtacctggcggcgctgaaattagccgtagtgaaattgatgac
tacacacagtttgttagcatctatggagccaaaggtttggcatggattaaggtgaattca
gttgcggaaggccgcaatggattgcaatcaccaatcgtcaagaatttgcatgacgcagcg
attgaaggcattttgaagcgcactggcgcaaaagatggcgacattattttctttggtgct
gataaagaaaaaatcgtgaacgatgccatcggtaatttgcgtctacgtatcggtcattcc
gcttggggtaaagagcacggcctctttactgaaggctggaagccattgtgggttgttgac
ttccctatgtttgactatgacgaaggcgaagcgcgttgggttgcttgccatcaccctttc
actagccctaaagatgaacacatgcagtatctggaaacggatcctggtaagtgcttggct
aaagcgtatgacatggttctgaatggtagcgagattggtggcggctctgtacgtattcac
caagaagcagttcaaagccaagtgttccgtgcgctgaagattgatgctgaagaagcgcaa
gcaaagtttggtttcttgttggacgccttgcagtatggcgcacctccgcatggtggcatc
gcatttggtttggatcgtatcgttacgatgatgactggtgccgaatcaatccgtgatgta
atcgcattccctaaaacacaacgcgcacagtgcttattaactcaggcgccaagcccagta
gatgagcgtcagttgcgtgaattacatatccgcttgcgtcaagctgcgcctgcagcataa
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