Polynucleobacter tropicus: DCO17_09605
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Entry
DCO17_09605 CDS
T08318
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptrp
Polynucleobacter tropicus
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrp03021
]
DCO17_09605 (rpoH)
Transcription machinery [BR:
ptrp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCO17_09605 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QKM65471
UniProt:
A0A6M9PZ27
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All DBs
Position
1894953..1895876
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AA seq
307 aa
AA seq
DB search
MVQKKSDKPNLQRLPVAQAAAASAFPMLPSLGVGTLDSYIAYVNRVPMLSAAEELHLAQE
FRRTENVDAAKTLVLSHLRLVVSVARQYLGYGIPHADLIQEGNVGLMKAVKRYDPSNGAR
LVSYAIHWIKAEIHEYILKNWRLVKTATTKAQRKLFFNLRSNKPTLNALTTAEVDALAKA
LDVKGSDVREMEMRLAGGDVALEGDDSDDEVAYAPIQWLADNSQEPTERIANAQAEALQG
PKLDQALMALDERSRNIVQSRWLAMDADGNGTKTLHDLAEEYGISAERVRQIETAALKKM
RGLLQAA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaagaaatctgacaaaccgaatttgcaaaggctgcctgtagcgcaggctgca
gcggcgtccgcatttccaatgctgccatcccttggggttggcacactcgattcttacatt
gcgtacgtaaatcgcgtaccgatgctcagtgctgcggaagagttacatcttgcgcaggag
tttcgtcgcactgaaaatgtagacgctgcaaaaactttggtgctttcacatttacgtctg
gtagtttctgttgctcgccaatatctcggctacggcattccgcacgccgatcttattcaa
gagggcaatgttggcctcatgaaggcggtgaagcgttacgatccaagcaatggcgctcgc
ttagtatcttatgcaattcactggatcaaagcggagattcatgagtacattctcaaaaat
tggcgcctggtaaaaacagcaacaaccaaagcacagcgtaagttgttttttaacttacgt
agcaataagcccacattgaatgcgctgacaacagccgaagtggatgcgcttgcaaaagcc
ttggatgtcaaaggctccgacgttagagaaatggaaatgcgtcttgctggcggcgatgtt
gcacttgaaggcgatgacagcgatgatgaggtggcttatgccccaatccaatggctggcc
gataatagccaagagccgactgagcgcattgctaacgctcaagccgaggcattacaaggt
cctaagcttgatcaagccctaatggctcttgatgaacgcagtcgcaatatcgttcaatct
cgctggctagcaatggatgcggatggtaacggcactaagaccttgcatgatcttgccgag
gaatatggtatttcagctgaacgcgttcgccaaattgaaacggcagcactcaaaaaaatg
cgcggcctgcttcaagcggcctaa
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