Polynucleobacter tropicus: DCO17_09990
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Entry
DCO17_09990 CDS
T08318
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00300
Lysine biosynthesis
ptrp00470
D-Amino acid metabolism
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01230
Biosynthesis of amino acids
Module
ptrp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCO17_09990
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DCO17_09990
Enzymes [BR:
ptrp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DCO17_09990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QKM65540
UniProt:
A0A6M9PSX3
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All DBs
Position
1967085..1967939
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AA seq
284 aa
AA seq
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MHGAGNDFIVLNGIDQDLSSITREQWQALAHRQFGIGSDQILIVEKPTRDDADFRYRIFN
ADGGEVEQCGNGSRCFVRFVLDQGLSNKNPLRVEVAHTVLTLKSHPDGQVEVNMGAPIFE
HSQIPFNANGLASMQEFHETLFAIPLNHPATHDSFVGVLSMGNPHAVQVVADIASAPVLE
EGPEIEKHAAFPKRVNAGYMQIMNRNEIALRVYERGAGETLACGTGACAAVVSGIRRGLL
DSPVKVHTRGGDLQIAWGGIANNVAEPVIMTGPAVTVFEGETEI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtgccggcaatgatttcattgtgcttaatggtatcgatcaagacttaagcagt
attacgcgtgagcagtggcaagctttagcgcaccgccaatttggtatcggctcagatcaa
attcttatcgttgaaaaacccactcgtgacgatgctgatttccgttatcgcatctttaat
gcggatggcggagaagtagagcaatgtggcaacggctcacgttgttttgtgcgctttgta
cttgatcaaggtttatcaaataaaaatcctctgcgtgttgaagtagcgcatacagttctt
acgctgaaatctcatcccgatgggcaggtggaagtgaatatgggtgcgccaatttttgag
catagccaaattccatttaatgcgaacggcttggctagcatgcaagagtttcatgaaact
ctttttgccattcctttgaaccaccctgcaacgcatgatagctttgtaggcgtcttatca
atgggcaacccccatgctgtgcaagtagtagctgatattgccagtgctccagttttagag
gaaggccctgaaattgaaaaacatgccgcctttcctaaaagagtgaatgccggctacatg
caaatcatgaatcgcaatgaaattgcattgcgcgtttatgaacgcggcgctggagaaact
ttggcttgcggaactggcgcctgcgcagcggtagtttcaggcattcgtagagggctactg
gactcaccagtaaaagtacatactcgcggcggagacctgcaaattgcgtggggcggtatt
gccaacaatgtagcagaacccgtgatcatgacaggcccagccgttactgtttttgaaggc
gaaacagaaatctaa
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