Pyrenophora tritici-repentis: 6338211
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Entry
6338211 CDS
T10215
Symbol
PtrM4_022490
Name
(RefSeq) Vesicle coat complex COPII, subunit SEC24-subunit SFB2-subunit SFB3
KO
K14007
protein transport protein SEC24
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
6338211 (PtrM4_022490)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6338211 (PtrM4_022490)
Membrane trafficking [BR:
ptrr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
6338211 (PtrM4_022490)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
6338211
NCBI-ProteinID:
XP_001932079
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All DBs
Position
1:complement(<5725391..>5728550)
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AA seq
1019 aa
AA seq
DB search
MSDFAAYHAMGTGSPNPNDPNRQRPPVAASPAGYYQAGSPAMAPPPGQYAGTPAQYGTPV
QQHEGYFPQQGAPQAHPQYQGDQDMNNLTGQMGAVGLGVDQAAQPKHKKKNRHAYHNIEG
PGGSQQAFNGAPQNGIPSQFMNQNSPQPGGAQWMEPQITPAMSQFPAPVNPLFSPGAQAS
PMQYAARTPAAPHQPGGAAVGSAQGRVDPEQIPSVPKSRDAPARYYLEHVYPTMEHHLPP
PATVPFVAFDQGNSSPKFARLTLNNIPLTAQALAATSLPLGMVLQPLATQQEGEQAIPVL
DFGEIGPPRCARCRAYINPFMQFKAGGNKVVCNLCTYPNDVPGEYFAPTDQSGVRTDRLQ
RPELTLGTVDFLVPKEYWSKEPVGLRWLFLVDVTAEAVNRGFLHGFCEGIMSALYGDSKS
ETDETEPTCRIPKGAKIGIVTFDKEMHFYNLNPNLTSAQMLVMSDLEDPFLPFSEGLFVD
PVESKTVITSLLTQLPNMFSEVKNPEPALLPTLNSAVAALSATGGKIVCSLAALPTWGPG
RLMLRDDGNMHNTDAERKLLQTEHPGFKKIAEKMVQNGIGVDFFLAAPSGGYLDIATIGH
VSAITGGEVFYYPNFHSPRDLLKLSKEIQHTVTRETGYQALMKVRCSNGLQVSGYHGNFY
HHTFGADLEFGVIDADKAIGVMFSYDGKLDPKLDAHFQSALLYTTAGGERRVRCTNIVAS
VSANTGECMKFVDQDAVVNIIAKEAAARMTEKSLKDIRGALTEKTVDILAGYRKNFTGNN
PPGQLVLPENLKEFGMYILGLIKSRAFKGGKEPTDRRVHDMRMIKSMGPLELSLYLYPRI
IAIHNLDPTDGFANEKGHLVMPEGIRASFSKVEEGGAYIVDNGQVCLLWLHAQVSPNLLE
DLFGEGNNSLKALDPFQSTLPILETHLNAQVRNILQYLETTRASKALTIQLARQGLDGAE
YEFARLLYEDRNNEAQSYVDWLVHVHRHIQLELAGQRKKEDSGDGVGSTFVGLRTPYWG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgctgcgtaccacgccatgggcacaggctctccaaatccgaatgatccg
aatagacagcgcccgccagttgccgcgagtcctgctggctactaccaggctggaagccct
gcaatggctccacctccgggccagtatgcgggcacaccagcgcagtatgggacgccagtc
cagcagcatgaagggtactttccacagcagggggcaccacaagcgcacccccaatatcag
ggcgatcaggacatgaacaatctgacaggacagatgggcgcggtcgggctgggtgtcgat
caggcggcgcaaccaaagcacaagaagaagaacaggcatgcatatcacaacattgaaggt
cctggaggcagtcagcaagccttcaatggcgcgcctcagaatggtataccgtcgcaattt
atgaatcagaactcgccgcagccgggaggagcgcaatggatggagcctcaaatcaccccc
gccatgagccaattccctgcaccagtgaatccgctgttcagcccaggagcgcaagcttcg
cccatgcaatacgcagcaagaacaccggcggcgcctcatcagccaggaggtgccgccgta
ggctcagcccaaggacgtgttgatcccgagcagatacccagtgtgcccaaatcgcgagat
gcgccagcgagatactacctcgagcatgtgtacccgaccatggagcaccacctaccacct
cccgccaccgttccgttcgttgcctttgaccaaggcaattcctcacctaaattcgcacgc
ttaacactcaacaacattccgctcaccgcacaagctctcgctgcaacttccctacccctt
ggaatggttctacaaccgctggctactcagcaggaaggtgaacaggccataccggtacta
gactttggcgagattgggccacccaggtgtgcaagatgtagagcgtacatcaatccattc
atgcagttcaaggctggcggaaacaaggtcgtatgcaacctttgtacatatcccaacgac
gttcccggagaatactttgcgcctacagatcagtctggtgtaagaacagacagattgcaa
cgaccggagcttacacttggcacggttgacttcttggtaccgaaggaatactggtccaag
gagcctgttgggctacgttggctattcttggttgatgtcacggccgaggctgtcaatcgt
ggctttctccatggcttctgcgaaggtataatgagcgcattgtacggcgattcgaaaagc
gagaccgatgagaccgaacccacatgtcggataccaaaaggtgccaagattggcattgtg
actttcgacaaagaaatgcatttctacaacctcaatcccaatttgacaagcgctcagatg
ctggtcatgtccgatcttgaggatcctttcttgccattcagcgaaggcttgttcgttgac
cctgtggaatccaagacagtcatcacatccctcctcacgcaactaccaaatatgttctct
gaagtcaagaatcctgagccggccctacttcctaccctgaactctgcggtggcagctttg
tcagccacaggcggaaaaatagtatgttcgttggctgcgcttcccacctggggtcctgga
agattgatgcttcgtgacgacggtaatatgcacaacaccgacgctgagaggaagcttctc
cagaccgaacatccagggtttaaaaagattgccgagaagatggtacaaaatggcattggt
gtggacttttttctggcagcaccgagcggcggctaccttgatattgcaactatcggtcat
gtttctgccataacaggtggagaagtcttctactacccaaacttccactcacccagggac
ttactcaagctgtccaaggagatccagcatacagtcacacgagaaaccggttatcaagcg
ctgatgaaggttcgatgctcaaacggtctgcaggtctccggttaccacgggaacttttac
caccacactttcggtgccgacttggagtttggagtcatcgatgctgacaaggccattggt
gtcatgttcagttacgatggcaaactagaccctaagcttgatgctcacttccaaagtgca
cttctctacacgactgccggcggcgagcgacgagtacgatgcaccaatattgtggctagc
gtgagcgcaaatactggtgaatgcatgaagtttgtcgaccaggatgccgtagtgaacatc
atcgccaaggaagctgctgcgcgtatgacggagaagagtctcaaagacatcagaggagct
ttgaccgagaagactgtagatatccttgctggctacagaaagaactttaccggcaacaac
cctcctggtcaactcgtgctaccggagaacctcaaggagttcggcatgtatattctcggg
ctgatcaagtcgagagccttcaagggcggcaaggaacctacggataggagagttcatgat
atgcggatgattaaatcgatgggtccgttggaactgtcgctatacctttacccacggatt
atcgcgatccacaatcttgacccgacagatggttttgccaacgagaaaggacatctggta
atgcccgaaggcatacgagcgtctttctccaaggtagaagaaggcggtgcatatattgtg
gataacggacaagtatgcttgctatggctgcacgcacaggtctcgcccaacctactcgaa
gaccttttcggcgaaggcaacaacagtctaaaagcgctcgaccccttccaatccaccttg
cccatcctcgagacccacctcaatgcacaagtgcggaacattttgcaatacctagagacg
accagagcgtccaaggctctgaccattcaacttgcccgacaaggcctggacggtgccgaa
tacgaattcgccaggctgctgtatgaagaccggaacaacgaggcccaaagctatgtagac
tggcttgtgcatgtacacagacatatacaactagagcttgccggtcaacgaaagaaagaa
gactcgggtgacggtgtgggatcaacgtttgtgggtctgcgaacaccgtactggggctaa
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