Pyrenophora tritici-repentis: 6338269
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Entry
6338269 CDS
T10215
Symbol
PtrM4_016190
Name
(RefSeq) GroL, Chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6338269 (PtrM4_016190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6338269 (PtrM4_016190)
03110 Chaperones and folding catalysts [BR:
ptrr03110
]
6338269 (PtrM4_016190)
03029 Mitochondrial biogenesis [BR:
ptrr03029
]
6338269 (PtrM4_016190)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6338269 (PtrM4_016190)
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
6338269 (PtrM4_016190)
Messenger RNA biogenesis [BR:
ptrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
6338269 (PtrM4_016190)
Chaperones and folding catalysts [BR:
ptrr03110
]
Heat shock proteins
HSP60 / Chaperonin
6338269 (PtrM4_016190)
Mitochondrial biogenesis [BR:
ptrr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
6338269 (PtrM4_016190)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
6338269 (PtrM4_016190)
Exosomal proteins of other body fluids (saliva and urine)
6338269 (PtrM4_016190)
Exosomal proteins of breast cancer cells
6338269 (PtrM4_016190)
Exosomal proteins of colorectal cancer cells
6338269 (PtrM4_016190)
Exosomal proteins of bladder cancer cells
6338269 (PtrM4_016190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
6338269
NCBI-ProteinID:
XP_001931555
UniProt:
B2VVL0
LinkDB
All DBs
Position
1:4103588..4105469
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AA seq
585 aa
AA seq
DB search
MQRAFASRARTSVLNSSSKLRSTSYNLQQQRFAHKELKFGVEARASLLKGVDTLAKAVST
TLGPKGRNVLIESSYGSPKITKDGVTVAKAITLQDKFENLGARLLQDVASKTNEAAGDGT
TTATVLARAIFSETVKNVAAGCNPMDLRRGTQAAVEAVVEYLRANKRDITTSEEIAQVAT
ISANGDTHIGKLLSNAMEKVGKEGVITVKEGKTTEDELEVTEGMKFDRGYISPYFITDTK
TAKVEFEKPLILLSEKKISAVQDIVPALEASQQLRRPLVIIAEDIDGEALAVCILNKLRG
QLQVAAVKAPGFGDNRKSILGDLAVLTNGTVFSDDLDIKLEKATPDMLGSTGSITITKED
TVILNGEGSKDQVSQRCEQIRGVINDPTTSEYEKEKLQERLAKLSGGVAVIKVGGSSEVE
VGEKKDRIVDALNATRAAVEEGILPGGGTGLLKASANALGSVKAANFDQQLGITIVKNAI
THPARKIVENAGAEGSVIVGKLIDEYKSDFNKGFNSAKGEYVDMIAAGILDPFKVVRTAL
VDASGVASLLGTTEVAIVEAPEEKGPPGGMPGGMGGMGGMGGMGF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagctttcgcatcgcgggcgcggacttcggtcctcaactcaagctctaagctg
aggtcgactagctacaaccttcagcagcagaggtttgcgcacaaggaactgaagtttggc
gttgaggcaagagcgtccctgctgaagggtgtcgacacactcgcaaaggctgtatcaaca
acactgggccccaagggtcgcaatgtattgattgagtcgagttatggatcccccaagatt
accaaggacggtgtaacagtcgcaaaggccatcactctccaagacaagttcgagaacctc
ggtgcccgcctccttcaggatgtcgcctccaagaccaacgaggctgctggtgatggtacc
acaactgctactgtcctcgcccgcgccatcttctccgagaccgttaagaacgttgccgct
ggttgcaaccccatggacctgaggcggggtacccaggccgccgtagaggcggttgttgaa
tacctgagggcaaacaagagggacatcaccaccagcgaagagattgcccaggtcgccacc
atctctgccaacggtgacacacacattggcaagcttctgtccaacgccatggagaaggtt
ggaaaggagggtgtcatcactgttaaggagggcaagacgaccgaggacgaactcgaggtc
actgaaggcatgaagttcgaccgtggttacatctccccctacttcatcaccgacaccaag
accgccaaggtagagtttgagaagcctctcatcctgctctccgagaagaagatctccgct
gtccaggacattgtcccggctcttgaggcctcccagcagctccgccgcccccttgtcatc
attgccgaggacattgacggtgaggcgcttgccgtctgcattctcaacaagctccgtggc
cagctccaggttgccgctgtcaaggcacccggcttcggtgacaaccgcaagtctatcctc
ggtgatctcgctgttctgaccaacggtaccgtcttcagcgatgatcttgatattaagctt
gagaaggccactcccgacatgctcggctccaccggatccatcaccatcaccaaggaggac
accgttatcctcaacggcgagggtagcaaggaccaggtctcccagcgttgcgagcagatc
cgcggcgtcatcaacgacccaaccacgtccgagtacgagaaggagaagcttcaggaacgt
cttgccaaactctctggtggtgttgccgtcatcaaggtcggtggctcatctgaggtcgag
gttggcgagaagaaggaccgcatcgtcgatgctctgaacgccacccgtgctgccgtcgag
gagggtatcctgcccggtggtggtactggtctgcttaaggcttcggccaacgctcttgga
tctgtcaaggcggccaactttgaccagcagcttggtatcaccattgtcaagaacgccatc
acccaccccgctcgcaagatcgttgagaatgccggtgcggagggatccgtcatcgtcggc
aagctcattgacgagtacaagagcgacttcaacaagggtttcaacagcgcaaagggcgaa
tacgtcgatatgatcgctgccggtatccttgaccccttcaaggttgtccgcactgctctt
gttgatgctagtggtgttgcgtcgcttctcggtaccaccgaggtggcgattgttgaggca
cccgaggagaagggtcctccaggcggcatgcctggcggtatgggtggtatgggaggcatg
ggcggcatgggcttctaa
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