Pyrenophora tritici-repentis: 6338751
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Entry
6338751 CDS
T10215
Symbol
PtrM4_016430
Name
(RefSeq) tetratricopeptide repeat protein 1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6338751 (PtrM4_016430)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
6338751 (PtrM4_016430)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_12
TPR_16
TPR_6
TPR_17
TPR_7
TPR_11
TPR_Slam
ARM_TT21_2nd
HAT_PRP39_C
ARM_TT21
ANAPC3
TPPII_C
ARM_TT21_4th
TPR_10
Motif
Other DBs
NCBI-GeneID:
6338751
NCBI-ProteinID:
XP_065965428
LinkDB
All DBs
Position
1:complement(4170705..4174333)
Genome browser
AA seq
1173 aa
AA seq
DB search
MAGGQANGANGVNGAGTMFPPPRYSDVPSSITISVADEEGGQLDVEIPLDDQIQDDPTEL
CDILEAEKSATSTWVQVAVAYAKHKRIDTAIDVLKQATGVFNRAHSEVRLSILNGLCWLY
LQKCREAPRVKPQNADGDTKLKDFWIQSATGVLNDASRISPSHPPLFLARGVLYLLKASL
QGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMAKMGKARVNYSMGKWADALKG
YQNILESSPDLLDPDPRIGIGCCFWQLGHKDEAATAWQRSLELNPKSKIALILLGIYNFQ
LTANLSTADPKFAALIKKATGEYIQPALKLDNQYPLSCATVGTYLILRKDLGKTEDVARR
AIELTDTNAIASDGWYLRAKIAHQQENTTLAAEYYSKSDQARGGEERGYIPAKFGLAQMN
VLMSNYDGAKFRLEKILQQSPNVEAQTLLGTLYAEDVFAAQNSKSTEDKSAELRKALKYL
ESVQNAWKDPKKKVIPDQSVLLNLARLYETDHPEKSLKCLEEVEQMEIDAIPEEDYPEGL
EEGAELKAALRQLLPPQLLNNMGCFQFQAERYVRAQELFQVALNACVNAENRDNTIDTDA
LVTSISFNLARTYEAEGEPEEAKKVYNSLLQRHPDYVDARIRLTYIALKEHPQDEGPRAM
KDLFKENEDNVEVRALYGWYVNKSKKRTQNFAADEEQRLYKHTLQKSDKHDRYSLMGMGN
IHLAIAREMPRSSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYS
TALQIFTKVKETLKDHSVYVNLGHTYCEIKQYARAIENYEAALSKNQHNNPKILACLGRT
WYLRARHERSVAGIRTALDYSKQALKAAPSDLNSQFNVAFVQFQIATMVYSLPEQQRTLQ
EVDEAATGLTEAIEALEKLAKEENPPFPRADITSRANMGRNTMVRQLERAREKQAAYEGE
NATKLDAARRLREAEVRRREEEKKRAEEEALEKKRKYAEEQERLIRRDRELMEKRNEEER
RRMEEDEDKELRKAERKARGPKGPKRKKKDADSDTDGLPSDDDEPRSRRRRTTASATEDP
SDDERPREKKKRKLARKSEPAGKFKSAEFIDDESDDEEPAHDADKAEANAATDDAAAPRP
RKARVVDDDDEDDDAIAAPKSNGDVAMDDDEDE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggtcaggcaaacggcgcgaatggcgtaaacggcgctggcaccatgttccca
ccaccacgatactcggacgtgcccagttctattaccatctcggtcgccgatgaggaagga
ggccagctggatgttgagatcccgctcgatgaccagatccaagacgacccaaccgagtta
tgcgacattctcgaggccgagaagagcgcgacatcaacgtgggtgcaggtcgccgtcgcc
tatgcaaagcacaagcgcatagacacggccatagacgtgctgaaacaggccacgggcgtc
ttcaaccgcgcccacagtgaagtccgcctcagcatcctcaacggcctgtgttggctgtat
ctgcaaaagtgtcgcgaagcaccgcgtgtgaagccccaaaatgcagatggcgacaccaag
ctgaaggacttctggatccaatccgctaccggagtgctcaacgatgcctcgcgaattagt
ccctcgcaccctcccttgtttctggctcgcggcgtcttatacctcctcaaggcctccctc
cagggtccagccacagccgctggctcgaccgttagtccagagcgcatggagacgctcaag
caggccgcaaagtgcttcgaggacgcgctgagagcttctggtggaaggaacctcatggcc
aagatgggcaaggcgcgcgtgaactactccatgggcaagtgggcagacgctctaaagggc
tatcagaacatcctcgagagttcgccagacctcctcgacccagatccacgtatcggtatc
ggctgctgcttctggcaattgggccacaaggacgaagctgccaccgcctggcaaaggtcg
ctcgaactcaacccaaagtctaaaatcgccctgatcctcctcggcatctacaacttccaa
ttgactgctaacctgtccaccgccgatcccaagtttgccgccttgatcaagaaggcaacg
ggcgaatacatccagcctgcgttgaagttggataaccaataccctctgagttgcgcaaca
gtcggaacctacctcatactcaggaaggacctgggaaagaccgaggatgtagccaggcgc
gccatcgagcttaccgacaccaacgctattgccagtgatggctggtatctccgggccaag
attgcgcaccagcaggagaacacgaccctcgcagcagaatactactccaagtccgaccag
gctcgcggaggcgaagagcggggctatataccagcaaagttcggtctggctcagatgaat
gtcttgatgagcaactatgacggtgccaagttccgtctagaaaagatcctccagcaatca
cccaacgtggaagcgcaaacattgctgggtactctctatgctgaggatgtatttgctgct
cagaacagcaaatccacagaggacaagtctgccgagttgagaaaggcactcaaatatctg
gaaagcgtccagaacgcatggaaggaccccaagaagaaggtcatacctgaccagtccgtg
ctgctcaacctggctcgtctctacgagacggatcaccccgagaagagcttgaagtgcctc
gaagaggtggagcagatggagattgatgccattccagaagaagactacccagagggcctg
gaagagggtgccgaactcaaagccgcactccgtcaactactgccaccacaacttctcaac
aacatgggttgcttccagttccaggcggagcgctacgtccgagctcaggagcttttccag
gtcgctctcaacgcttgtgtcaatgccgaaaaccgtgacaacaccatcgatacagatgca
ctcgtcacttccatcagctttaacctcgctcgaacctacgaagccgagggtgagccagag
gaagccaagaaagtctacaatagtctactccaacgacaccccgactatgttgacgcacgc
attcgtctgacctacatcgccctcaaagaacaccctcaagacgaaggcccaagggcaatg
aaggatctcttcaaagagaacgaagacaacgtcgaggtccgagcgctctatggatggtat
gtgaacaagtcgaagaagaggacgcagaatttcgcggccgacgaagagcaacgcctttat
aagcacactctacaaaaatcggacaagcacgatcggtactcactcatgggtatgggcaac
attcatcttgccattgctcgtgaaatgcctcgcagttcagagcaagacaaggagaagcgc
cgaaaaggttacgagcgagccgtcgagttcttcgacaaggtgctgcaactggaccccaag
aacgcatatgcagcgcagggtatcgccatcgccttggttgaggataaaaaggactactcg
acagctctgcaaatcttcacaaaggtcaaggagacgctcaaggatcacagcgtctatgtc
aacttgggtcatacatactgcgagatcaaacagtacgctcgagccattgaaaattatgaa
gccgctctgtcaaagaaccaacacaataacccgaagatcttggcctgccttggacgaacc
tggtaccttcgagcccgacacgagcgcagtgtagccggtatccgaactgcactcgactac
tcaaaacaagctctcaaggctgctccatcagatctcaactcccaattcaacgtcgccttt
gtccagttccagatcgctaccatggtttactctctcccggagcagcagcgtactcttcaa
gaggtcgatgaggctgccacgggtctcacagaagccatcgaagcgcttgagaagctcgcc
aaagaggaaaatccgcctttcccacgcgcggatatcacatctcgtgcaaacatgggtcgc
aacaccatggtcaggcaattggagcgcgcccgcgaaaagcaggctgcatacgaaggcgag
aacgcaaccaagctcgacgcagcacgccgtctccgcgaagcagaagtccgtcgacgagaa
gaagagaagaaacgcgcggaagaagaagctctggagaagaagcgcaagtacgccgaggaa
caggaacgccttatccgtcgcgaccgcgagctcatggaaaagcgcaacgaagaagagcgc
agacgtatggaggaagacgaagacaaggaacttcgcaaggcggagcgcaaagcccgtggg
cccaagggccccaaacgcaagaagaaggacgcagactctgataccgacggtctgccctcg
gacgacgatgagccccggtcaaggcgaaggaggactacggctagtgccacggaagatcca
tccgatgacgagcgcccccgcgagaagaagaagaggaagcttgcccgcaagagcgaaccg
gctgggaaattcaaatccgcagagtttatcgacgatgagagcgacgacgaggagcctgca
catgatgccgacaaagctgaggctaacgctgcaactgacgatgctgctgctccgcgtccc
cgcaaggcccgcgtcgtagacgacgatgatgaagatgacgatgctattgctgcgcccaag
tcaaacggtgatgtcgctatggatgacgatgaggatgagtag
DBGET
integrated database retrieval system
