Pyrenophora tritici-repentis: 6338838
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Entry
6338838 CDS
T10215
Symbol
PtrM4_028460
Name
(RefSeq) WD40 repeat protein
KO
K11360
transcriptional activator SPT8
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6338838 (PtrM4_028460)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6338838 (PtrM4_028460)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
6338838 (PtrM4_028460)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
6338838 (PtrM4_028460)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
DUF7730
2EXR
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
6338838
NCBI-ProteinID:
XP_065966015
UniProt:
A0A834SA42
LinkDB
All DBs
Position
1:complement(7343151..7348196)
Genome browser
AA seq
1097 aa
AA seq
DB search
MAGLSSLLRESGRSSKPHDPNAKSFLTLPAELRNRIYDLLFESKERMRVIFSKTHKSEDE
ITGTHFRSKTGSAVALFSTYKKILKEAAPVLYTRNTFILSQEKAPMLRIGSHKKVGAVGP
FQTWISTIGSNAQLLRHVTLDVYATCYDENYFYPRWSGQIDETGVLDVLGILQVLWSADL
TLEMSFIVATCLSDSSWDRSYNVAAMTRNFHALRDDQLNLRRYLPLLDAVHLNLNGSGGL
ILWYTSANHASEDKYPQIWHEPTYTSKIVSGDDDANRLSIIERKSPMTLMGLPHYLLTKI
WSDVILPPEGITVDLDTETHFKNEATYTNRRLYKEWRGLFLNLNPLTAKMTTSTVRSDFS
NFTKLRQLLRTAFSSTNSTYTDSTLQLQAGFEMILDFRLGQLAALEDLRVSVLILVLESC
HVPANSTIRIRLWRLDSVYVTDQVVIGLEQLRRKVVAALEEFVKSDTHKAAPEIWINADG
QVVEVVEKPAPNREDPLMPMPEMASQVRPRNSISNGGASGQADGNPSVTLTSPSPRAGAS
GVLGNLPFHPSVRQEALNAPFYDIIPTIAAPHSTSINAITATPDMRWVFSGGADGYIRKF
NWVDTANGKLALTVAQRHPFVDSVTKAGVLLSYWENEDTAGGSETLSPVYSLAVHHQALW
LLSGLDSGGINLQSVRHQEGTRIHTLKNHTSAVSVLTLSQDETSVLSGSWDKTINDWDLN
TGQVKRKFETSGSQISAIEQRPLSTLPIPQDTETLPQANGTFSSNNSARPRANGSLPNGL
DTKPAAQKDEGAEDAQGSPDDSLFGDKDQDSLFGDGQENNLSATMPSFGDDDDEFSRAIA
NGIQQADEDANVDLDMMDMGGPVQEPQEAANEVLKEPPAAAEAQPATNGTAESQPNGTAN
GLPHAEDIEKPINTVSQTEQPASSETTFMDASIDGTLRIWDRRQPNPVARITPPRNTPPW
CMNACWSPDGNFIYAGRRNGTVDEYSLHKSLREPRRTFRFPSVSGAVSAVRAMPNGRHLV
CASYDILRMYDLSHDDGGTKVGAAATPFLIVPGHRTGVISQLYLDPTCNFMISTGGNRGW
EGASTEVMLGYEIGIGS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccggtctatcatcgctgttgcgcgaaagcggtcgcagctccaaaccccacgaccca
aacgctaaatctttcctcacactaccggccgagttgcgaaaccggatctatgacctcttg
ttcgaatccaaggagcgtatgcgcgtcatcttcagcaaaacacacaagtcagaagatgag
attaccggtactcattttcgtagcaagacaggatctgcggtagcgttattctctacctat
aagaagatcctaaaagaagcggctccagtactctacacgagaaacactttcatcctaagt
caagagaaagctcccatgctcaggatcggatcccataaaaaggttggtgccgtgggacct
ttccaaacatggatcagtaccatcggttcaaacgctcagctgctccgccatgttacactt
gacgtgtacgcaacttgctatgacgagaactacttctaccccagatggtcgggacagata
gatgagacaggtgtgctggatgtgttgggaatattgcaggtgctctggagcgccgatctt
acgctagaaatgagcttcatcgtcgccacatgcctgtcggattccagctgggaccgaagt
tacaacgtagctgccatgacgcgcaacttccacgctctacgagacgaccaattgaatctt
cggagatatcttccgttattagatgccgtacatctcaatctcaatggatctggtgggctg
attctgtggtatacaagtgccaaccatgcctctgaagacaagtatcctcagatatggcat
gagccgacatacacgagcaaaattgtatcaggtgacgatgatgcgaaccggctgagtatt
attgagagaaaaagtccgatgacactcatgggacttcctcattatcttttaacaaagatt
tggagcgacgtcatcctcccccccgagggtattaccgtcgaccttgataccgaaactcac
ttcaaaaacgaggcgacgtacacaaatcgacgcttatacaaggagtggcggggcctcttc
ttgaacctaaaccccttgacggctaagatgactacttctacggtacgcagtgacttctcg
aattttacaaagcttcgtcaactactccggactgctttcagttctaccaattccacgtat
accgactccactcttcagctgcaggctggatttgagatgatactagacttcagactcggg
caattggcagcacttgaagacctgcgtgtcagcgtgctgattcttgtcttggagtcatgc
catgttccggctaattcaacgatcagaatacgtttgtggcgactcgattcagtctatgtg
actgatcaagtggtcatcggccttgagcagctgcgtcgcaaagtcgtggcagccttagaa
gaatttgtgaagtctgatactcacaaagcggcgccagagatatggatcaacgcagacgga
caggttgtagaagttgtcgaaaagccagctccgaatcgagaagacccgttgatgccgatg
ccagaaatggcgtcgcaagtgcggccgcgcaacagtatttcaaacggtggcgcatctgga
caagcggatggaaacccctctgttaccctcacttcccccagcccacgagcgggggcctcg
ggcgttttgggcaatctacccttccaccccagtgtacggcaagaggccttgaacgcgccc
ttctacgacatcataccgaccatcgcggcaccgcatagtacctcgatcaacgcgattaca
gcaaccccggatatgcgatgggtcttcagtggaggtgcagacggatatattcggaaattc
aattgggtagatacggctaacgggaagcttgctctgactgtagcccagcgacatccgttt
gtggactcggtcacaaaggctggcgtcttgctctcatactgggagaatgaagacactgca
ggagggtcagagactttgtcccccgtctattcacttgcagtacaccaccaagcgctgtgg
ctgctgtcgggtctggactcgggcggtataaatctacaatccgtgcgccaccaggaaggg
acacggatacacacgctcaagaaccacacctcggctgtttcggtcttgaccttgtcgcag
gatgagacgtctgtactgagtggcagctgggataagactatcaacgactgggacctgaat
actggacaagtcaaaaggaagtttgaaactagcggtagtcagatctccgctatcgaacag
cgaccgctatctacactacccataccacaagatacggaaacccttcctcaagccaacgga
accttttcctcaaacaactccgcgcggccccgggccaacggcagtcttccgaacggcctc
gacacaaagccagcagcgcaaaaggacgagggtgctgaagatgctcaaggttctccggat
gactcgctatttggagacaaggaccaggactctttattcggcgatggccaggaaaataat
ctctcagcaacaatgccttcattcggagacgacgacgacgagttctcaagagccatcgca
aacggcatacagcaggcggacgaagacgccaacgtcgatctagacatgatggacatgggc
ggcccagttcaggagccccaagaagcggccaacgaagtactgaaggagcctccggctgct
gctgaagcacagccggcaacgaacggaaccgcagagtcgcaacccaatggcaccgctaat
ggcctgccacacgcagaggacatcgaaaagcctatcaacacagtaagtcagactgagcaa
ccagcttcgtccgaaacaaccttcatggacgcctcgatcgacggcacactacgtatctgg
gaccgccgacaaccaaaccccgttgcgcgtataacacccccgcgcaacaccccgccttgg
tgtatgaacgcctgctggtcgccagatggcaacttcatctacgcgggtaggaggaacggt
accgtggacgagtacagtctacacaagagtctacgggaaccaagacgaacattcaggttc
cccagcgtcagcggtgccgtaagtgccgtgcgagcaatgcctaatggcagacacctagtc
tgcgcctcatacgacattttgcgcatgtacgatctctcacatgacgacggcggaaccaaa
gtaggcgctgctgctacccccttcctcatcgttcctggtcatcgaacgggtgtcatttct
cagctttacctcgaccccacgtgcaactttatgatctcgacaggtgggaacagaggatgg
gagggcgcttctacagaggtgatgctcggctacgagattggtattggatcttag
DBGET
integrated database retrieval system
